Streptomyces scabiei: SCAB_30761
Help
Entry
SCAB_30761 CDS
T01187
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scb
Streptomyces scabiei
Pathway
scb03420
Nucleotide excision repair
scb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCAB_30761
03430 Mismatch repair
SCAB_30761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scb03400
]
SCAB_30761
Enzymes [BR:
scb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCAB_30761
DNA repair and recombination proteins [BR:
scb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCAB_30761
MMR (mismatch excision repair)
Other MMR factors
SCAB_30761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CBG70179
UniProt:
C9ZBS1
LinkDB
All DBs
Position
complement(3486581..3490252)
Genome browser
AA seq
1223 aa
AA seq
DB search
MSVAPASLSGMSARISDPEQLKELLGIPFTPEQTACIIAPPAPQVIVAGAGSGKTTVMAA
RVVWLVGTGQVAPEQVLGLTFTNKAAGELAERVRKALVRAGITDPDVIDPDHPPGEPVIS
TYHAFAGRLLTDHGLRIGLEPTSRLLADATRYQLAARVLRESPGPYPALTRSFPDLVGDL
LTLDAELAEHLVRPEDLTAHDIELLRELEGVALTNADLRKVPEAAAARRELTELVVRYRA
AKRERDLLDFGDQIALSARLAGLPEVGRVLRDEFRVVLLDEYQDTSVAQRVLLAGLFGGG
TGHPVTAVGDPCQAIYGWRGASVANLDDFPDHFAHPDGRRATRQALSENRRSGGRLLDLA
NGLAEPLRAMHAGVEALRPARGAERDGVVRCALLNTHAEELDWLADSIAHLVRTGKEPGE
IAVLCRTAGDFAEIQGALVARDVPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVR
LLTGPRWRIGPRDLALLGRRARRLVSHARVDGDQDPDRRLAAAVEGVDPSEVVSLADALD
TFLELPLEAEREDDGLPFSPDARVRFARLATELRDLRRSLADPLMDVLHRVLAVTGLEVE
LSASPHALAARRRETLSNFLDIAASFAANSAGEATLLAFLGFLRTAAQYEKGLDNALPGG
ENTVKVLTAHRSKGLEWDVVAVPGLVTGTFPSTQGREKWTAQGKVLPHTLRGDADTLPDV
GAWDSRGLKAFQEAMKDHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQKRPRGPSDFLT
ALHDHCAAGYGEIEAWADEPGEGAENPALHRSAADHAWPLPLDDTALLRRRAAAATVLAH
LERAASHEGTDPADHASGHPFSDHPSSDHPDWPPPSDDEEPFYEDIHPDDVPHEDDVPPA
DAFGDPGEDTGDWDSWSSDRPPHVVHAREDPPEQDARPPAVPHARRHPAASGLSPEEART
VASWDRDLDALAGELLRARAKVTDVPLPASLTAAQLMRLAADPDGFAQELARPMPRPPQP
AARRGTRFHAWVEARFEELRLPMLEPGELPGSEAEIADERDLEALKEAFERTPYAHRTPY
RVEEPFQLGIAGRVVRGRIDAVYRLGDGDGGSDGDGTTYEIVDWKTSRTRNADPLQLAVY
RLAWAEQQGVPLESVKATFLYVRTGDVVRPENLPDRDALERLLLEDAGADAVTAPGAHRP
RPAAYRTGAVADEPPDEHIGAGR
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagtggcccccgctagcctctctggaatgtccgcccgtatcagcgaccccgagcag
ctcaaggagctcctcggcatcccgttcaccccggaacagacggcctgcatcatcgcgccg
cccgccccgcaggtgatcgtggccggagccgggtcgggcaagacgacggtgatggccgcg
cgcgtggtgtggctggtcggcaccggacaggtcgcgcccgaacaggtgctcggtctgacg
ttcaccaacaaggcggcgggcgaactcgccgagcgcgtgcgcaaggccctggtcagggcg
ggcatcaccgacccggacgtgatcgaccccgaccacccgccgggcgagccggtcatctcc
acgtaccacgccttcgcgggccgcctgctgaccgaccacggcctgcgcatcggtctggaa
cccacctcccggctcctcgccgacgccacccgctatcagctcgccgcccgcgtcctgcgg
gagtcgccgggcccgtacccggcactgacccgctccttcccggacctggtcggcgacctg
ctgaccctcgacgccgaactcgccgaacacctcgtacggcccgaggacctgaccgcccac
gacatcgaactgctgcgcgaactcgaaggcgtcgcgctgaccaacgcggacctccgcaag
gtccccgaggctgccgcggcccgacgcgaactcaccgagctggtggtccgctaccgcgcg
gccaagcgcgagcgggacctcctcgacttcggcgaccagatcgccctgtccgcccgcctc
gccgggctccccgaagtgggccgcgtcctgcgggacgagttccgggtggtcctgctcgac
gagtaccaggacacctcggtcgcccaacgcgtcctgctggccggactgttcggcggcggc
accggccatcccgtgaccgcggtcggcgacccctgccaggccatctacggctggcgcggc
gcctccgtcgccaacctcgacgactttcccgaccacttcgcccaccccgacggccggcgc
gccacccgccaggcactcagtgagaaccgccgcagcggtggccgtctgctcgacctcgcc
aacggcctcgcggagcccctgcgggccatgcacgcgggcgtggaggcactgaggcccgcc
cgcggcgccgaacgcgacggcgtggtccgctgtgccctgctgaacacgcacgccgaggaa
ctggactggctcgccgattcgatcgcccacctcgtgcgcaccggcaaggaacccggcgag
atcgcggtcctgtgccgtaccgccggtgacttcgccgagatccagggcgcgctcgtcgcc
cgtgacgtcccggtcgaggtcgtcggactctccggactgctccacctccccgaggtcgcc
gacctcgtcgccgtctgcgaggtcctccaggaccccggcgccaacgcctccctcgtccgc
ctcctgaccggcccccgctggcggatcggcccgcgtgacctcgccctcctcggccgccgg
gccaggcggctcgtctcccacgcgcgcgtggacggcgaccaggaccccgaccgccggctc
gccgcggccgtcgagggggtcgacccgtccgaggtggtctcgctggcggacgccctggac
acgttcctggaactcccgctcgaagccgagcgggaggacgacgggttgccgttctcgccg
gacgcgcgcgtgcggttcgcccggctcgcgaccgaactgcgcgacctgcgccgctcgctc
gccgacccgctcatggacgtcctccaccgggtgctcgccgtcaccggcctggaagtggag
ctctccgcgtccccgcacgcgctcgccgcccgccgccgcgagaccctgtcgaacttcctg
gacatcgccgcctccttcgccgccaacagcgccggcgaggccaccctcctcgccttcctc
ggcttcctgcgcacggccgcccagtacgagaagggcctcgacaacgcgctgcccggcggc
gagaacaccgtcaaggtgctcaccgcccaccggtccaagggcctggagtgggacgtcgtc
gccgtccccggcctggtcaccggcaccttccccagcacacagggccgcgagaagtggacg
gcacaggggaaggtcctgccgcacacgctgcgcggcgacgccgacacccttcccgacgtc
ggcgcctgggactcgcgcgggctgaaggccttccaggaggccatgaaggaccaccagcac
accgaggaactccgcctcggctacgtcaccttcacccggccccgctccctgctcctcggc
tcggggcactggtggggcccgtcccagaagcgcccgcgcggaccgtccgacttcctcacc
gccctccacgaccactgcgccgccgggtacggcgagatcgaggcatgggccgacgaaccc
ggggagggcgccgagaacccggccctgcaccggtcggcggccgaccacgcctggcccctc
ccgctcgacgacacggccctgctgcgccgccgcgccgccgccgcgaccgtactggcccac
ctggagagggccgcgtcccacgagggcacggacccggccgaccacgcctcggggcacccc
ttctccgaccacccctcgtccgaccatccggactggccgcctccgtcggacgacgaggag
cccttctacgaggacatccacccggacgacgtgccccacgaggacgacgtcccaccggcg
gacgccttcggggaccccggcgaggacaccggcgactgggactcctggtcgtcggaccgg
cccccacatgtcgtgcacgcgcgcgaggaccccccggaacaggacgcgcgaccgccggcc
gtgccgcacgcccgcaggcaccccgcggcctccggcctcagccccgaggaggcccgcacc
gtcgcctcgtgggaccgcgacctggacgccctcgccggagaactcctgcgggcccgcgcc
aaggtcaccgacgtacccctgcccgcgtcgctgacggcggcgcagctgatgcggctggcc
gccgatccggacggcttcgcacaggagctcgcgcgccccatgccgcgccccccgcagccc
gcggcgcgtcgcggcacccgcttccacgcctgggtcgaggcccgcttcgaggagctgcgg
ctgcccatgctggagcccggggagctgcccggcagcgaggcggagatcgccgacgaacgg
gatctggaggcactcaaggaggcattcgaacgcaccccctacgcccaccgcacgccgtat
cgcgtggaggagcccttccagctggggatcgccggacgcgtcgtacgcggccgcatcgac
gccgtgtaccgcctgggcgacggcgacggggggagcgacggtgacgggacgacgtacgag
atcgtcgactggaagaccagccgcacccgtaacgccgacccgctccagctcgccgtctac
cggctcgcctgggccgaacagcagggcgtgcccctggaatccgtcaaggcgaccttcctg
tacgtccgcacgggcgacgtcgtacggcccgagaacctgcccgaccgggacgccctggaa
cggctgctcctggaggatgccggcgccgacgcggtgacggctcccggcgcacaccggccg
cgaccggccgcgtaccgaaccggggcggtcgccgacgaaccgccggacgagcacatcggt
gcgggccgatag
DBGET
integrated database retrieval system
