Streptomyces scabiei: SCAB_33481
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Entry
SCAB_33481 CDS
T01187
Symbol
xseA
Name
(GenBank) putative exonuclease VII large subunit XseA
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
scb
Streptomyces scabiei
Pathway
scb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SCAB_33481 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scb03400
]
SCAB_33481 (xseA)
Enzymes [BR:
scb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SCAB_33481 (xseA)
DNA repair and recombination proteins [BR:
scb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SCAB_33481 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
CBG70445
UniProt:
C9ZF61
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All DBs
Position
3779004..3780230
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AA seq
408 aa
AA seq
DB search
MALNTSAESPLPVGEVSRLIGGWIDRLGAVWVEGQITQLSRRPGAGVVFLTLRDPSHDIS
VGVTCYRQVFDTVADVVGEGARVVVLAKPEWYAPRGQLSLRATEIKPVGVGELLARLEQL
KKSLAAEGLFAPERKKTLPFLPQLIGLVCGRASAAERDVLENARRRWPAVRFEVRNVAVQ
GVHAVPQVVRAVKELDALDDVDVIVVARGGGSVEDLLPFSDEQLVRAVASCRTPVVSAIG
HEPDTPLLDYVADLRASTPTDAAKKVVPDVGEEYERVRWLRDRARRCVEAFVEREERGLA
HALARPSMEDPHRMIDERADHVASLLDRGRRCLGHHLDRAVSELTHTHARVVALSPAATL
QRGYAVLQRADGHVVRAPDEAGPDEPLRARVAGGEFVVRVEGTGTVAD
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcactcaacacgtccgccgaatcccccctccccgtcggcgaggtctcccgcctcatc
ggcggctggatcgaccggctcggcgcggtgtgggtcgaggggcagatcacgcagctgtcg
cggcgtccgggcgcgggcgtcgtgttcctcacgctgcgggacccgtcgcacgacatctcc
gtgggggtgacctgctaccgccaggtgttcgacacggtggccgacgtggtcggcgagggc
gcccgggtcgtcgtcctggcgaagcccgagtggtacgcgccgcgcggccagctgtcactg
cgggccacggagataaagccggtcggggtcggtgaactgctggcccggctggaacagttg
aagaagtcgctggccgcggagggcctgttcgcgccggagcggaagaagacgctgcccttt
ctgccccagctgatcggactggtgtgcggccgggcctccgcggccgagcgggacgtgctg
gagaacgcccggcggcgctggccggccgtccgcttcgaggtgcgcaacgtcgcggtgcag
ggggtgcacgcggtgccgcaggtcgtgcgggccgtcaaggagctggacgcgctggacgac
gtggacgtcatcgtcgtggcgcgcggcggcggcagtgtggaggacctcctgccgttctcc
gacgagcagctcgtacgggcggtcgcgtcctgtcgtacgccggtcgtgtcggcgatcggg
cacgagccggacaccccgctgctggactatgtggcggacctgcgcgcgtccacgccgacc
gacgcggccaagaaggtcgtgccggacgtgggcgaggagtacgagcgggtgcggtggctg
cgggaccgggcgcgccgctgtgtggaggcgttcgtggagcgggaggagcgggggctcgca
cacgccctcgcgcgcccctcgatggaggatccgcaccgcatgatcgacgagcgcgccgac
cacgtggcctcgctgctcgaccggggccgccgctgcctcgggcaccatctggaccgtgcg
gtctcggagttgacgcacacgcacgcgcgcgtggtggccctgtccccggcggcgacgctc
cagcgggggtacgcggtgctgcagagggccgacggccatgtggtccgcgcgccggacgag
gccgggccggacgagccgctgcgggcgcgggtggccgggggcgagttcgtcgtccgggtc
gagggaacggggacggtcgccgactga
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