Streptomyces scabiei: SCAB_35921
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Entry
SCAB_35921 CDS
T01187
Name
(GenBank) putative ATP-dependent DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scb
Streptomyces scabiei
Pathway
scb03420
Nucleotide excision repair
scb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCAB_35921
03430 Mismatch repair
SCAB_35921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scb03400
]
SCAB_35921
Enzymes [BR:
scb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCAB_35921
DNA repair and recombination proteins [BR:
scb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCAB_35921
MMR (mismatch excision repair)
Other MMR factors
SCAB_35921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
CBG70681
UniProt:
C9YUU7
LinkDB
All DBs
Position
complement(4055469..4057979)
Genome browser
AA seq
836 aa
AA seq
DB search
MSSLFDDSFLADLQAPRGHAEEPPPPPEDDHVPEPLPDDLFGGKFDVPPDRDAYYRDGAP
RPAIDAAALLDGLNDNQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIAHLLGERRVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQATDGFEKTLAQAYAL
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGTSEHPVDVPPDEWDVPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQ
NYRSTQTILSAANAVIERNESRRPKNLWTNAGAGAQITGYVADTEHDEAQFVADEIDRLT
DAGDAKAGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLAN
PEDSVPLRRILNVPKRGIGDRAEAMVDALSQREKISFPQALKRVDEAYGMAARSTNAVKR
FNTLMDDLCTVVESGAGPATILEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEF
EQESGAAEAEGEEAAANPAGLPAFLERVALVADSDQIPDEEEDGSGVITLMTLHTAKGLE
FPVVFLTGMEDGVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRSSLRSAWGQPSY
NPPSRFLEEIPATHLEWKRTGASTPVSSGPASGVASSLSSSRSRSSASGASGFATRRGNE
KPVVSLAVGDRVTHDQFGLGTVVGVGGSGANAEATIDFGDAKPKRLLLRYAPVEKL
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggacctccaggccccccgcggccacgcg
gaggagcccccgccgccgcccgaggacgatcacgtaccggagccgcttccggacgatctg
ttcggcgggaagttcgacgtgcctccggaccgggacgcgtactaccgcgacggcgccccc
cgccccgcgatcgacgcggcggcgctcctggacgggctgaacgacaaccagcgcgcggcc
gtggtccacgcgggctcgcccctgctcatcgtcgccggcgccggctccggcaagacccgg
gtgctcacccaccgcatcgcccacctgctcggcgagcgacgggtccacccggggcagatc
ctcgcgatcaccttcaccaacaaggccgccggcgagatgaaggagcgcgtcgagcagctc
gtcggcccgcgcgcgaacgcgatgtgggtcatgaccttccacagcgcgtgcgtccggatc
ctgcggcgcgagtccaagaagctcggcttcacgtcctccttctcgatctacgacgccgcc
gacagcaagcgcctgatggcgctcgtctgccgcgatctggacctcgacccgaagcgtttc
ccgcccaagtccttcagcgccaagatctcgaacctgaagaacgagctgatcgacgaggag
gacttcgccgcccaggccaccgacggcttcgagaagaccctcgcccaggcgtacgcgctc
taccagtcccgcctccgcgaggcgaacgcgctcgacttcgacgacctgatcatgacgacg
gtcaatctgctgcgcgccttcccggacgtcgccgagcactaccgccgccgtttccggcat
gtcctcgtcgacgagtaccaggacaccaaccacgcgcagtacgccctggtcagggagctg
gtcggcacctccgagcatcccgtggacgtaccgcccgacgagtgggacgtaccgcccgcc
gagctctgcgtggtgggtgacgccgaccagtcgatctacgccttccgcggcgcgaccatc
cgcaacatcctccagttcgaggaggactacccggacgcgacgacgatcctgctggagcag
aactaccgctccacccagaccatcctgagcgcggccaacgcggtcatcgagcgcaacgag
tcccgccgcccgaagaacctgtggaccaacgcgggcgcgggcgcgcagatcaccggctat
gtcgccgacaccgagcacgacgaggcccagttcgtcgccgacgagatagaccggctgacg
gacgcgggcgacgccaaggccggcgacgtcgcggtcttctaccggacgaacgcccagtcc
cgtgtcttcgaagaggtgttcatccgcgtcggcctgccctacaaggtcgtcggcggcgtc
cgcttctacgagcgcaaggaggtccgcgacgtcctcgcgtatctgcgtgtcctcgccaac
ccggaggactccgtcccgctgcgccgcatcctcaacgtgcccaagcgcggcatcggcgac
cgcgcggaggcgatggtcgacgccctgtcgcagcgcgagaagatcagcttcccgcaggcg
ctcaagcgggtcgacgaggcctacggcatggcggcccggtcgaccaacgcggtcaagcgg
ttcaacacgctgatggacgacctgtgcacggtcgtcgagtccggcgccggacccgcgacc
atcctggaggcggtcctcgaacggaccggctacctggccgagttgcaggcgtccaccgac
ccccaggacgagacccgcatcgagaacctccaggaactcgccgccgtcgccctggagttc
gagcaggagtccggggccgcggaagccgagggcgaggaggcggccgcgaaccccgccggg
ctccccgccttcctggagcgggtggcgctggtggccgactcggaccagatcccggacgag
gaggaggacggctcgggcgtcatcacgctcatgaccctccacaccgccaagggcctggag
ttcccggtcgtcttcctcaccggcatggaggacggcgtcttcccgcacatgcgtgccctc
ggccagaccaaggaactggaggaggagcgccgcctcgcgtacgtcgggatcacccgcgcg
cgggaacggctctacctcacccgttcctcgctccgcagcgcctggggccagccgtcgtac
aacccgccgtcccgcttcctggaggagatcccggcgacccatctggagtggaagcgcacg
ggtgcctccacaccggtgtcctccggaccggcctccggggtcgcgtcctcgctgtcctcg
tcccggtcccgttcctcggcctcgggggcgtccggcttcgcgacgcgccgcggcaacgag
aagccggtggtctcgctcgccgtgggcgaccgcgtcacccacgaccagttcggcctcggc
acggtcgtcggcgtcgggggctcgggggcgaacgcggaggcgacgatcgacttcggcgat
gccaagccgaagcggctgctgctgcggtacgcgccggtggagaagctgtag
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