Streptomyces scabiei: SCAB_36651
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Entry
SCAB_36651 CDS
T01187
Symbol
truA
Name
(GenBank) putative tRNA-pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
scb
Streptomyces scabiei
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scb03016
]
SCAB_36651 (truA)
Enzymes [BR:
scb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SCAB_36651 (truA)
Transfer RNA biogenesis [BR:
scb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCAB_36651 (truA)
Prokaryotic type
SCAB_36651 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
CBG70753
UniProt:
C9YW49
LinkDB
All DBs
Position
complement(4142614..4143477)
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AA seq
287 aa
AA seq
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MSDEAAPGHVRVRLDLSYDGSEFSGWAKQAGGRRTVQGEIEDALRTVTRSGETYELTVAG
RTDAGVHARGQVAHVDLPEAVWREHHEKLLKRLAGRLPRDVRVWALREAPSGFNARFSAI
WRRYAYRVTDNPGGVDPLLRGHVLWHDWPLDVDAMNEAARLLLGEHDFAAYCKRREGATT
IRTLQELSLVRGDDGIVTATVRADAFCHNMVRSLIGALLFVGDGHRGADWPGKVLAAGVR
DSAVHVVRPHGLTLEEVGYPADELLAARSREARNRRTLPGAPGAGCC
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgatgaagcggcgcccggtcatgtccgcgtccggctggacctgtcgtacgacggg
agcgagttctccgggtgggccaagcaggccggggggcggcggaccgtccagggggagatc
gaggacgcgctgcggaccgtgacgcggtccggggagacgtacgagctgaccgtggccggg
cggaccgatgccggggtgcacgcgcgcgggcaggtggcgcacgtggacctgccggaggcg
gtctggcgtgaacaccacgagaagctgctgaagcggctcgcggggcgcctgccgagggac
gtacgggtctgggccctcagagaggcgcccagcggcttcaacgcgcggttctcggcgatc
tggcgccggtacgcctaccgggtcaccgacaatcccggtggggtcgatccgctgctgcgc
gggcacgtgctgtggcacgactggccgctcgacgtggacgcgatgaacgaggcggcccgg
ctgctgctgggcgagcacgacttcgccgcctactgcaagcggcgcgagggggccaccacc
atccgtacgctccaggagctgagcctggtgcggggggacgacgggatcgtcaccgcgacc
gtgcgggccgacgccttctgccacaacatggtgcgctcgctgatcggggcgctgctgttc
gtgggggacggacaccggggcgccgactggccggggaaggtgctggccgcgggggtgcgg
gactccgcggtgcacgtcgtacggccgcacgggctgacgctggaggaggtcggctacccg
gcggacgagctgctggccgcgcggagcagggaggcgcggaaccggcggacgctgccgggg
gcgcccggggccggctgctgctga
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