Streptomyces scabiei: SCAB_38281
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Entry
SCAB_38281 CDS
T01187
Name
(GenBank) putative long-chain-fatty acid CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
scb
Streptomyces scabiei
Pathway
scb00061
Fatty acid biosynthesis
scb00071
Fatty acid degradation
scb01100
Metabolic pathways
scb01212
Fatty acid metabolism
scb02024
Quorum sensing
scb04146
Peroxisome
Module
scb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SCAB_38281
00071 Fatty acid degradation
SCAB_38281
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SCAB_38281
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCAB_38281
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scb01004
]
SCAB_38281
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scb04147
]
SCAB_38281
Enzymes [BR:
scb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SCAB_38281
Lipid biosynthesis proteins [BR:
scb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SCAB_38281
Exosome [BR:
scb04147
]
Exosomal proteins
Exosomal proteins of breast milk
SCAB_38281
Exosomal proteins of breast cancer cells
SCAB_38281
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
CBG70909
UniProt:
C9YZ46
LinkDB
All DBs
Position
complement(4304062..4306020)
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AA seq
652 aa
AA seq
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MSSLEHTEPAPVEPELKRLDGTVREAYVPALAESAAYGSLADIPFDNATHAPDSVVLSRK
RGGGPADGNADGSPDRERDADAGDGEWRDVTAAEFAAEVLALAKGLIAEGLMPGDRIAIM
ARTTYEWTLLDFAAWAAGLVTVPVYPTSSVFQTRWILQDSGAVALAVETAGQAAALGPEL
DRIPDLRHMWVFDKGHLGRLAELGRDVSDQEVAVRRGVLGPDTLATLIYTSGTTGRPKGC
ALTHGNFCAEVDNAIDLLYPIFRAKTDEEASTLLFLPLAHVFGRMVAIGCMRARVRLGHS
PSFRTEDLLADLKSFRPTFLLVIPYVLEKVFNTARASAERMGRASSYDRAAAVARRYGEA
LEAEQHGTGPGPSAFLRTARTFYDPLVYRRIRKALGGRVRYVICGGSPLGRRLAAFYAGA
GIDVFEGYGMTETTAAVTVTPPNLPRLGTVGRPLPGTRVRIAADGEILLHGGQIFRGYWD
PQAGGVVPAGPDGWFATGDIGRLDDEGYLTITGRKKEILVTDSGKNVAPAPLENWLRSHP
LIAHAMVIGDRRPYVTALLTLDPEGITHWALMNAKQDLPLDRLATDPDLRAVLQRAVDEA
NRLVSRPESIRRFTIVPGGFTEEEGHLTPSMKLRREVVERSFADEIEGLYEK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagcctcgaacacaccgaacccgcgccggtggagcccgagttgaagcggctggac
ggcaccgtgcgggaggcgtacgtacccgcgctcgccgagtcggcggcctacggctccctc
gcggacatcccgttcgacaacgcgacccacgcacccgactcggtcgtcctcagccgcaag
cgcggcggcgggccggcggacggaaacgccgacgggagcccggaccgggagcgggacgcc
gacgcgggcgacggcgagtggcgggacgtgacggcggccgagttcgccgccgaggtgctg
gcgctcgcgaagggcctgatcgccgagggcctgatgccgggcgaccgcatcgcgatcatg
gcgcggacgacgtacgagtggacgctgctggacttcgcggcctgggcggcgggtctggtg
acggtccccgtctacccgacctcctccgtcttccagacccgctggatcctccaggactcg
ggcgcggtcgcgctggccgtggagacggcgggccaggccgccgccctcggccccgaactg
gaccgcatccccgacctgcgccacatgtgggtcttcgacaagggccacctgggccggctg
gccgagctgggccgggacgtgtccgaccaggaagtcgccgtacggcgcggggtgctgggc
cccgacaccctcgcgaccctcatctacacctcgggcacgaccggccgccccaagggctgc
gccctcacccacggcaacttctgcgccgaggtcgacaacgcgatcgacctcctctacccg
atcttccgcgcgaagacggacgaggaggcgtccaccctcctcttcctccccctcgcccat
gtgttcggccgcatggtggcgatcggctgtatgcgggcgcgggtgcgcctcggccactcg
ccgagcttccgcaccgaggacctcctcgccgacctcaagtccttccgcccgaccttcctc
ctggtcatcccctacgtcctggagaaggtcttcaacacggcccgcgcctccgccgaacgc
atgggccgcgcctcctcgtacgacagggccgccgccgtggcccgccgttacggcgaggcc
ctggaggccgagcagcacggcaccggccccggcccctccgccttcctcagaacggcccgc
accttctacgaccccctggtctaccgccgcatccgcaaggcgctgggcggcagggtccgt
tacgtcatctgcggaggcagccccctcgggcgccgcctggccgccttctacgccggcgcg
ggcatcgacgtcttcgagggctacggcatgacggagacgacggcggccgtgacggtcacc
ccgcccaacctgccccgcctgggcacggtcggccgtcccctccccggcacgcgcgtgcgg
atagccgccgacggcgagatcctcctgcacggcggccagatcttccgcggctactgggac
ccccaggccggcggagtcgtccccgccggccccgacggctggttcgccaccggggacatc
gggcggctcgacgacgaggggtacctcacgatcaccggccgcaagaaggagatcctcgtc
accgacagcggcaagaacgtggcgccggccccgctggagaactggctccgctcccacccc
ctgatcgcccacgccatggtcatcggcgaccgccgcccctacgtcaccgccctgctcacg
ctggaccccgagggcatcacccactgggccctgatgaacgccaagcaggacctccccctc
gaccgcctcgccaccgacccggacctgcgcgccgtcctgcagcgcgcggtggacgaggcc
aaccgcctcgtctcgcgccccgagtccatccgcaggttcacgatcgtccccggcggcttc
acggaggaggagggccacctcaccccgtcgatgaagctgcgccgggaggtcgtggagcgc
tccttcgcggacgagatcgaggggttgtacgagaagtag
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