Streptomyces scabiei: SCAB_40561
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Entry
SCAB_40561 CDS
T01187
Name
(GenBank) putative decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
scb
Streptomyces scabiei
Pathway
scb00300
Lysine biosynthesis
scb00470
D-Amino acid metabolism
scb01100
Metabolic pathways
scb01110
Biosynthesis of secondary metabolites
scb01120
Microbial metabolism in diverse environments
scb01230
Biosynthesis of amino acids
Module
scb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SCAB_40561
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SCAB_40561
Enzymes [BR:
scb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SCAB_40561
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CBG71132
UniProt:
C9Z2B8
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All DBs
Position
4561169..4562293
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AA seq
374 aa
AA seq
DB search
MVELDRIADGVNLAREAHPRIRVTYAVKASYHRPILDAVRAAGAGVSAFSEMEMALARTA
KFAPYDIVYNGVGREGADLATAVDAGVTVNLESLAELRGLLHARRADASAGRIGFRVNGC
VPGESDTLGKYGVLGISVAQLPTVADLLRGSGLVLGGVSFHHLANRLDGTAHLDTLDRLI
PALAPLSGHPAVALDYIDVGGGLASRLEVGDESAVEMFRALADRIDADLDCTTILELGRF
LVADAESLLSRVVDMRTSGGVMVAILDATTNYLIPAPGHRFRVERLEPLAQGETRTPVRF
VDRLGSTICENHCGPLRPGTLVGVLNAGAYAGVMKEHFVYPLPDVSFVRDDAVIATSPAG
GDKAVRAHHHWPET
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgaactggaccgcatcgccgacggggtgaacctggcccgggaggcacacccgcgc
atacgggtcacctatgccgtgaaagcctcctaccaccggccgatccttgacgccgtgcgt
gcggcgggggcgggtgtcagcgccttttccgagatggaaatggcccttgcccgcaccgcg
aaattcgctccgtacgacatcgtctacaacggtgtgggccgtgagggtgcggatctcgcc
accgcggtcgacgccggcgtcacagtcaacttggagtcactcgctgagctgcgcggcctt
ctccacgcccggcgcgcggacgcgtcggccggccggatcggcttccgcgtcaatggttgc
gtgccgggcgagagtgacacgctcggcaagtacggcgtcctcgggatttccgtcgcccaa
ctgccgacggttgcggacttgctccgggggtccggcctggttctcggcggtgtcagcttc
caccacttggccaaccggctcgacggcaccgctcacctcgacaccctggaccggctgata
cccgcgctggctccgctgtccgggcatcctgcggtcgctctcgactacatcgacgtgggc
ggcgggctggccagccgactggaggtgggcgacgagagcgcagtggagatgtttcgcgcg
ctcgccgaccggatcgacgcggatctcgactgcaccacgatcctcgaactcggccggttc
ctggtcgccgacgccgagtccctgctcagccgagtggtagacatgcggacgagtggcggc
gtcatggttgcgatcctggatgcgacgacgaactacctgatcccggcgcccggtcatcgg
ttccgggtggagcggctggagcccctcgcccagggcgagacccggacgccggtgcggttc
gtcgaccggctcggcagcacgatctgtgagaaccactgcgggccgctccggccgggcacc
ctggtcggcgtgctcaatgcgggcgcgtatgccggtgtcatgaaggaacacttcgtctat
ccgctgcctgacgtgtccttcgtcagggacgacgcggtcatcgccacgtcgcccgctggc
ggcgacaaagccgtgcgggcccaccaccactggcccgagacatga
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