Streptomyces scabiei: SCAB_40641
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Entry
SCAB_40641 CDS
T01187
Name
(GenBank) putative secreted ligand-binding protein
Organism
scb
Streptomyces scabiei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tox-MPTase5
RHS_repeat
TEN_YD-shell
DUF6443
SpvB
Motif
Other DBs
NCBI-ProteinID:
CBG71140
UniProt:
C9Z2C6
LinkDB
All DBs
Position
complement(4570978..4577385)
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AA seq
2135 aa
AA seq
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MRASRRHRTHPWARALGVTLTSALTVTLLQGTPALGDDPDEAREKRRPKTQDVASTPVVD
QDGTATPLKHTKGYGKPLDLKANWPKAGSATVDLAGSKKRGALSSAKAGSLPVRVGPPKG
MTRSTMAAATPTRAKVDVLSHAAARKAGIDGLLLKVTRADSRTTNGRVSVEVDYAAFAQA
YGGDWAQRLRLVELPACALTTPEAAKCQSVTPLKTDNDVREQRLTADVAALSSAKAPLLA
VAAGPAGGSGSYAATSLAPSASWQVAGQTGGFTWQYPLRVPPAVAGPSPQLGLGYNSAST
DGRTASSNNQTSWIGEGFDLSAGYIERSYQACTEDGHDEAGSQKYDLCWHSDNATMNFGG
RAGELVKKGENEWRLKQDDGTLIERKYDGSNADNNNEYWVVTTTDGTRYHFGKGKRESAD
TEFTGSSWEVPVFGDDKDEPCHADTFKESRCQQSWRWNLDYVVDVHGNTMTYYYSTETNK
YDSVRGDKVVSYDRGGYLKRIEYGEQAGKENTTTAPSQVVFTTAERCTGAAADCEPADLK
ESTAKRWPDVPFEQICTSDTECKDQWSPTFFSRKRLAKVTTQVLGADGKTYGDVDEWDLA
HKYQSADTTHAPALWLESVTHSGKDGAHKLPKVTFYERQDANRVHSDAHDRLPMYKWRIR
AIQSETGGTISVNYKPTECTPSNLPTPETNTKRCMPSFWSKEGTIGEKEDWFHKFVVDTV
IEDEVTITGPNKVTSYDYSGAAWAFDDSELVKTKKKTWNQWRGYRTVTMKTGEAGGKQLR
SQTTYLQGMDGDREKDSGGTKSVTVTASDGTKVRDDARHQGFAVEQQSFNGAAEVTGSVS
TPWKSEPTATEGKDEASYAAVKTIHTRTALDDGKVRRAAIEHFYDSYGMLSRSSDSGDLT
VEDDDTCTTNEYNRNTAANLLTLLKRVTVVPVNCDEGAPTSYKGEAVSDVRTWYDDRDTY
GTTPTKGDVVRSEKVKAYTADGTPQYVTTSTARYDAHGRVVESADQANNATKTTYTPTTG
GPVTGMKVEDPLGNTTTSTVDRRWGLVTATVDPNKQRTDLEYDALGRLLKVWLPGRAKAS
DTPSLEYAYLIRNNAPVVTTTKSLLPNGSVATSHQLSDGLLRPRQTQTPAANSGRVITTT
EYDTRGLAVKEIGPFYNTAAVGTTFVNVVDASEGTPRETETVYDAAGRATDSIFRVAGTE
KWRTKTAYHGDHTTVDPPAGSTPTATYTDAQGQTTKVLEFKASSPTGAAGTTSYDYDAAG
RLVEVKDAAGNVWSSEYDVRGRQTKAVDPDAGTSWMTYNDLDQLKTIRNDREITLTYTYD
KLGRQRSLYNGDKKLTTWEYDSATVPNGKGRLTSATKWVGDDGYTSSVDAYDVAGRPTKS
SVTVPASEGKLAGTYTATASYKPDGSIDDIGLPAVGGLPAETVTTGYTATGLPSFTLGDS
TDYARETRYSNYGEMLQLTLGTASADKYTWLTNTYEEGTRRLERARIDREIVKTSDSDIT
YGYDATGNIQKIADAPEGKTADVQCFTYDYLRRLTEAWTQTATTCAPSAGEATVGGPAPY
RHSYTYDAAGNRTSEVRHATGTTGDAAITQSTTYVPKATDTKGGTHAHALKSAEVRTATA
AKEATAAQSFQYDEAGNTVRRTKAATDLSPAVDQKLNWDEEGRLSAVTPYLSGDNLDEAN
KTSYVYDASGGRLLRKEKGAVTLYLGGQEIRLDTAKNTLAGTRYYYHADQEIAVRTTSGV
TWLVGGQNGTAEIAIKAADSAITQRRTLPFGEARGAKPAAGAWPGDKSFVGGTADATTGL
IQLGARAYDPASGRFVSVDPVLNVGDPQHLNAYAYGRNNPLAFPDPTGLYWGESWISPIG
HGALDAVGLVPGFGEPADLLNGLWYTAEGNYIDAGLAYAAAIPLAGYAASAAKGARYVNK
AVDAADTATDATKATEKTKDAVDAADKVTPPVTPKLKEKPAPAPPAKAKEAPQAKKGDSG
GKKGDGAEAKSDAGGGGGKDAEAPAKGKASAEEQGSGNVWKSSEELSKATGKTTASRNRA
IDAIISEDFPDLNLTHRPVYSYGVNSGMAKPNVGTHIGFKRFASRALLRNTVVHEELHHR
WFARGLRNHHPRDGSGTSERFYGIIDRYMSIRGWS
NT seq
6408 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgcatctcgcagacacagaacacacccctgggccagagccctcggtgtcaccctc
acttcagccctgaccgtcaccctgctccagggcacgccggccctcggcgacgaccccgac
gaggccagggagaagcggcgccccaagacccaggacgtcgcctccaccccggtcgtcgac
caggacggcacggccaccccgctcaagcacaccaaggggtacggcaaacccctggacctc
aaggccaactggccgaaggccggcagcgccaccgtcgatctcgccggttccaagaagcgc
ggcgcgctgtcgagcgccaaggccggctcgctcccggtccgcgtcggcccgcccaagggc
atgacccgttccacgatggcggccgccacgcccacccgcgccaaggtcgacgtcctcagc
cacgccgccgcgcggaaggccggcatcgacggcctcctgctcaaggtgacccgggccgac
agccggaccacgaacggcagggtgtccgtcgaggtcgactacgcggccttcgcccaggcc
tacggcggtgactgggcgcagcggctgcgtctggtcgaactgcccgcctgtgcgctgacc
acgcccgaggcggccaagtgccagagcgtcaccccgttgaagaccgacaacgacgtccgt
gagcagcggctcaccgccgatgtggcggcgctgtcctccgcgaaggctccgctgctggcg
gtcgccgccggaccggcgggcggttccggctcgtacgccgcgacctcgctggctccgtcc
gcgtcctggcaggtcgccgggcagaccggcggcttcacctggcagtacccgctgcgcgtg
ccgcccgccgtcgcgggcccctccccgcagctgggcctcggctacaactccgcgtccacg
gacggccgtacggcctccagcaacaaccagacgtcctggatcggcgagggcttcgacctc
agcgccggctacatcgagcgctcgtaccaggcctgcacggaggacggccacgacgaggcc
gggtcgcagaagtacgacctgtgctggcactccgacaacgccaccatgaacttcggcggc
cgggccggtgagctggtcaagaagggcgagaacgagtggcgtctgaagcaggacgacggc
accctcatcgagcgtaagtacgacggctccaacgccgacaacaacaacgagtactgggtc
gtcaccaccaccgacggcacccgctaccacttcggcaagggcaagcgcgagtccgccgac
accgagttcaccggctcctcctgggaggtcccggtcttcggtgacgacaaggacgagccc
tgccacgccgacaccttcaaggaatcccgctgccagcagtcgtggcgctggaacctcgac
tacgtcgtcgacgtgcacggcaacacgatgacgtactactacagcaccgagaccaacaag
tacgactcggtgcgcggcgacaaggtggtctcctacgaccgcggcggctacctgaagcgg
atcgagtacggggagcaggcgggcaaggagaacacgaccaccgcgccctcgcaggtcgtc
ttcaccaccgccgagcgctgcacgggcgccgccgccgactgcgaaccggccgatctgaag
gagtccacggccaagcgctggccggacgtgccgttcgagcagatctgcacctccgacacc
gagtgcaaggaccagtggtccccgaccttcttctcccgcaagcggctggcgaaggtcacc
acccaggtcctgggcgcggacggcaagacgtacggggacgtcgacgagtgggacctggcg
cacaagtaccagagcgccgacaccacccacgccccggccctgtggctggagtcggtcacc
cactccggcaaggacggcgcccacaagctccccaaggtcaccttctacgaacgccaggac
gccaaccgggtccactccgacgcccacgaccgcctgcccatgtacaagtggcgtatccgg
gcgatccagtcggagacgggcggcacgatctcggtcaactacaagccgaccgagtgcacc
ccgtcgaacctccccacccccgagaccaacaccaagcgctgcatgccgtccttctggtcg
aaggagggcacgatcggggagaaggaggactggttccacaagttcgtcgtcgacacggtg
atcgaggacgaggtcacgatcaccggcccgaacaaggtcacctcctacgactactccggt
gctgcctgggccttcgacgacagcgagctcgtcaagaccaagaagaagacctggaaccag
tggcgcggctaccgcaccgtcaccatgaagaccggtgaggcgggcggcaagcagctccgc
agccagaccacctacctgcagggtatggacggcgaccgggagaaggactccggcggcacc
aagtccgtcaccgtcaccgcctccgacggcacgaaggtccgtgacgacgcccgccaccag
ggcttcgccgtggaacagcagagcttcaacggggccgccgaggtgaccggttcggtgagc
accccgtggaagtccgagcccacggcgacggagggcaaggacgaggcgtcctacgcggcc
gtcaagaccatccacaccaggacggcgttggacgacggcaaggtccgtcgcgccgccatc
gagcacttctacgactcgtacggcatgctgtcccgctcctccgactccggcgacctgacg
gtcgaggacgacgacacctgcacgacgaacgagtacaaccgcaacaccgccgccaacctg
ctcaccctgctgaagcgcgtcaccgtcgtccccgtcaactgcgacgagggcgcgccgact
tcgtacaagggcgaggcggtctccgacgtccgcacctggtacgacgaccgcgacacctac
ggcaccacgcccaccaagggtgacgtggtccgcagcgagaaggtcaaggcctacaccgcc
gacggcaccccgcagtacgtgaccacgtccaccgccaggtacgacgcgcacggccgtgtc
gtggagtccgccgaccaggcgaacaacgcgacgaagacgacctacacgcccaccaccggc
ggcccggtcaccggcatgaaagtcgaggacccgctcggcaacacgaccacctccacggtc
gaccgccgctggggcctggtcaccgccacggtcgaccccaacaagcagcgcaccgacctg
gagtacgacgccctcggccgtctgctgaaggtctggctcccgggacgcgccaaggcctcg
gacaccccgagcctcgaatacgcctacctgatccgcaacaacgcgcccgtcgtcaccacc
accaagtcgctccttcccaacggctcggtggccactagtcaccagctcagcgacggcctt
ctgcgcccccgccagacccagaccccggcggcgaactcgggccgcgtcatcaccaccacc
gagtacgacacccgcggtctggccgtgaaggagatcggccccttctacaacacggcggcc
gtcggcacgacgttcgtgaatgtggtggacgcctccgaggggacccctcgggagacggag
acggtctacgacgcggcgggccgcgccaccgactcgatcttccgcgtcgcgggcaccgag
aagtggcgcaccaagaccgcgtaccacggcgaccacacgacggtcgacccaccggcgggc
tccacgccgaccgcgacctacaccgacgcgcaggggcagacgaccaaggtcctggagttc
aaggcatcctcgcccacgggagcggcgggcacgacgtcgtacgactacgacgcggcgggc
cgcctcgttgaggtcaaggacgctgcgggcaacgtctggtcgtccgagtacgacgtgcgg
ggccgtcagaccaaggccgtcgatccggacgcgggcacgtcgtggatgacgtacaacgac
ctcgaccagttgaagacgatccgcaacgaccgtgagatcaccctcacctacacctacgac
aagctgggccgtcaacgctcgctgtacaacggcgacaagaagctgacgacttgggaatac
gacagcgcgaccgtgccgaacggcaaggggcgtctgacctcggccaccaaatgggtcggg
gacgacggctacacaagctcagttgacgcctatgacgtggcgggccggccgacgaagtcc
tcggtgaccgtcccggcctccgagggcaaactggccgggacatacacggctacggcgtcg
tacaagccggacggctcgatcgacgacatcggcctcccggcggtcggcggcctcccggcg
gagacggtcaccacgggttacacggcgaccggtctgccgtccttcaccctgggcgactcg
acggactacgcccgcgagacgcgctactccaactacggcgagatgctccagctgaccctg
ggcaccgccagcgcggacaagtacacctggctcaccaacacctacgaggagggcacccgg
cgcctggagcgcgcccgcatcgaccgggagatcgtcaagacctccgactccgacatcacc
tacggctacgacgccaccggcaacattcagaagatcgccgacgcgcccgagggcaagacg
gcggacgtccagtgcttcacctacgactacctgcgccgcctgaccgaggcatggacccag
acggccaccacctgcgctccgagcgccggtgaggcgaccgtcggcggcccggccccgtac
cggcactcctacacctacgacgcggcgggcaaccgcacgagcgaggtccgccacgcgacc
ggcacgaccggcgacgcggcgatcactcagtcaacgacgtatgtacccaaggccacggac
accaagggtggcacgcacgcccacgccttgaagtcggccgaggtgcgtaccgcgacggcg
gccaaggaagcgacggcggcccagagcttccagtacgacgaggcgggcaacaccgtccgt
cgcaccaaggcggcgacggacctctccccggcggtcgaccagaagttgaactgggacgag
gagggccgcctgagcgcggtgaccccgtacctgtccggcgacaacctggacgaggcgaac
aagacctcgtacgtgtacgacgcctcgggcggacgcctgctccgcaaggagaagggcgcg
gtcacgctctacctgggcggccaggagatccgcctggacacggcgaagaacacgctggct
gggacccgctactactaccacgcggaccaggagatcgccgtacggacgacttccggggtg
acctggctggtcggcggccagaacggcaccgcggaaatcgccatcaaggcggcggactcg
gcgatcacacagcgccgcaccctccccttcggcgaggcgcgcggcgccaagccggcggca
ggtgcgtggccgggtgacaagtccttcgtgggcggcacggcggacgcgacgacggggctg
atccagctcggtgcccgcgcgtacgatccggcgtccggccgtttcgtctccgtcgacccg
gtactgaacgtcggggacccgcagcacctcaacgcctacgcttacggccgcaacaacccg
ctcgcgttcccggacccgacgggtctgtactggggcgagtcctggatcagcccgatcggt
cacggcgccctggatgccgtgggcctggtccccggcttcggtgagcccgccgacttgctg
aacggcctttggtacacggctgagggcaactacatcgacgcgggcctggcctatgccgcg
gcgattccgctcgcgggctacgcggcgtcggcggcgaagggcgcgcgctacgtcaacaag
gcggtggacgccgccgacacggcgaccgacgccacgaaggcgaccgagaagaccaaggac
gcggttgacgcggccgacaaggtcacgccgccggtgaccccgaagctgaaggagaagccc
gctccggctccgccggccaaggcaaaggaggccccccaggccaagaagggcgactccggc
ggcaagaagggcgacggcgcggaggcgaagtccgacgccggtggcgggggcggcaaggac
gccgaggctccggccaagggcaaggcctccgccgaagagcagggaagcggcaacgtttgg
aagagcagtgaagagctcagcaaggccaccggaaagacgacagcatccagaaatcgcgcc
attgatgccatcatcagcgaagatttcccggacctcaatctcacccatcgccccgtttac
agctacggggtaaactccggcatggcgaagcctaacgtaggaacgcacattggatttaag
cggtttgctagtcgggcgctccttcgtaatactgtggtccacgaggaactgcaccaccgc
tggttcgcgcgcggtctcaggaaccatcatccacgcgacggctccgggacatcggagcga
ttttatggaatcatcgaccgctacatgtcgatcaggggctggtcatga
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