Streptomyces scabiei: SCAB_40871
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Entry
SCAB_40871 CDS
T01187
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
scb
Streptomyces scabiei
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
SCAB_40871
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
CBG71161
UniProt:
C9Z2E7
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All DBs
Position
4610364..4612838
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AA seq
824 aa
AA seq
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MAFNHLPAGVHDALAPLSVTPVTHSMPMAKNHRSDRSPTDTASSPSPGTVLDRLASGPSR
ASRITHTEHVPPRAGRHAVWPDRIRPEVLAAVQAAGIEHPWAHQARVAEHALDGESVVVA
TGTASGKSLAYLVPVLSRLLDGSEAPNGRGATALYLAPTKALAADQRRSVKEFSQPLGNA
VRPAVYDGDTPVEEREWVRQYANYVLTNPDMLHRGILPSHPRWSSFLRALKYVVIDECHT
YRGVFGSHVAHVLRRLRRLCARYGAEPVFLLASATAAEPSVAARRLTGLPVTEVADDASP
RGELVFALWEPPLTELHGEKGAPVRRTATAETADLLTDLVVQGVRSVAFVRSRRGAELIS
VIAQERLAEVDRSLARRVAAYRGGYLPEERRALERALHSGELLGLAATTALELGIDISGL
DAVLIAGYPGTRASLWQQAGRAGRAGQGALAVLVARDDPLDTFLVHHPEALFDQPVESTV
LDPDNPYVLAPHLCAAAAELPLTDEDLPLFGPACEELLPQLEAAKLLRRRAKAWHWTRRE
RAADLADIRGQGGRPVQVVETGTGRLLGTVDAGAAHTTVHEGAVHLHQGRTYLVRELDLD
DSVALVEQADPPYSTVARDTTAISVLETDTEVPWGDGRLCYGSVEVTNQVVSFLRRRLIT
GEVLGESKLDLPPRTLRTRAVWWTVTEDQLDAARINPEILGGALHAAEHASIGMLPLFAT
CDRWDIGGVSVPLHPDTLLPTVFVYDGHPGGAGFAERAFHTARAWLTATRQAIASCECDA
GCPSCIQSPKCGNGNDPLHKRGAVRLLTELLRAAPDTPSADRTP
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcattcaatcacttaccggcaggcgtgcacgacgccttggctccattgtccgtcacg
ccggtgacacactcgatgccgatggccaagaatcaccgatccgatcgatccccgacggac
accgcttccagcccctcgccgggcacagtcctggaccggctcgcctcggggccgagccgg
gcttcgcgcatcactcatacggagcatgtgcccccacgtgcgggccgccatgccgtctgg
cccgaccggatccggccggaagtgctcgccgccgtccaggccgccggaatcgaacacccc
tgggcccaccaggcacgcgtggccgagcacgcgttggacggcgagtcggtcgtcgtcgcc
accggcaccgcctcgggcaagtcgctggcctatctcgtcccggtcctgtcccgcctcctg
gacggctccgaggcccccaacggccgcggcgccacggcgctctacctggcgcccaccaag
gctctcgcggctgatcagcgccgctctgtgaaggaattttcacaacctctgggaaacgcc
gtccgcccggccgtgtacgacggcgacacccccgtcgaggaacgcgaatgggtgcgccag
tacgccaactacgtcctcaccaaccccgacatgctccaccgcggcatcctcccgtcccac
ccccgctggtcctccttcctgcgcgccctgaagtacgtcgtcatcgacgagtgccacacc
taccggggcgtcttcggctcccacgtcgcccacgtcctgcgccgcctgcggcgtctgtgc
gcccgttacggcgccgagcccgtcttcctgctggcctcggccaccgccgccgagccctcg
gtcgccgcgcgccgcctcaccggtctcccggtcaccgaggtcgcggacgacgcctcaccc
cgcggtgaactggtgttcgccctctgggagcccccgctcacggaactccacggcgagaag
ggcgcgccggtgcggcgcaccgcgaccgcggagacggccgacctgctgaccgacctggtc
gtgcagggcgtccgctcggtagccttcgtacgctcccggcgcggcgccgagctcatctcc
gtgatcgcccaggagcgcctcgcggaggtcgaccgctccctcgcccggcgcgtcgccgcc
tatcgcggcggctacctccccgaggaacgccgcgccctcgaacgcgcccttcactccggc
gagctcctcggcctcgccgccaccaccgccctcgaactcggcatcgacatctccggcctg
gacgccgtcctcatcgccggctacccgggcacccgcgcctccctgtggcagcaggccggc
cgcgccggacgcgccggccagggcgccctcgccgtcctcgtcgcccgcgacgacccgctg
gacaccttcctggtccatcaccccgaggccctgttcgaccaaccggtggaatcgaccgtc
ctcgaccccgacaacccctacgtcctcgccccccatctctgcgccgccgccgcggaactc
cccctcacggacgaggacctccccctgttcggacccgcctgcgaggaactgctgccgcag
ctggaggccgcgaaactgctccgccgccgcgccaaggcctggcactggacccgccgcgag
cgggccgccgacctcgccgacatccggggccagggcggccggcccgtccaggtcgtcgag
accggcaccggccggctcctcggcacggtcgacgcgggcgccgcccacaccaccgtgcac
gagggcgcggtccacctgcaccagggccgtacgtacctggtgcgcgaactggacctggac
gactccgtcgccctcgtcgaacaggccgacccgccctactcgaccgtcgcccgcgacacc
accgccatctccgtcctggagacggacaccgaagtcccctggggcgacggccgcttgtgc
tacggctccgtcgaagtcaccaaccaggtcgtctccttcctccgtcgacgcctcatcacc
ggtgaggtgctcggcgagtccaagctcgacctccctccccgtacgctgcgcacccgcgcg
gtctggtggaccgtcaccgaggaccagctcgacgcggcccgcatcaaccccgagatcctc
ggcggcgccctccacgcggccgaacacgcctcgatcggcatgctgccgctcttcgcaacc
tgcgaccgctgggacatcggcggcgtctccgtcccgctccacccggacaccctgctgccg
accgtcttcgtctacgacggccatccgggcggcgcgggcttcgccgagcgcgccttccac
accgcacgcgcctggctcaccgccacccgccaggccatcgcctcctgcgagtgcgacgcc
ggctgcccgtcctgcatccagtcccccaagtgcggcaacggcaacgacccgctgcacaaa
cggggcgccgtacgcctgctgaccgaactgctccgggctgcccccgacactccgtcggcg
gaccggacgccctga
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