Streptomyces scabiei: SCAB_44201
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Entry
SCAB_44201 CDS
T01187
Name
(GenBank) putative beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
scb
Streptomyces scabiei
Pathway
scb00052
Galactose metabolism
scb00511
Other glycan degradation
scb00600
Sphingolipid metabolism
scb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
SCAB_44201
09103 Lipid metabolism
00600 Sphingolipid metabolism
SCAB_44201
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
SCAB_44201
Enzymes [BR:
scb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
SCAB_44201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Laminin_G_3
Glyco_hydro_2
Glyco_hydro_2_N2
BetaGal_gal-bd
Glyco_hydro_42
PRISE
Motif
Other DBs
NCBI-ProteinID:
CBG71483
UniProt:
C9Z789
LinkDB
All DBs
Position
4962851..4966786
Genome browser
AA seq
1311 aa
AA seq
DB search
MPHPHPHTGTPAARPVMSRRRLLEGGAALLGAVALSGGAAHAAPLLASKADGTPEWSGNM
ALFQVGAEPPHTTLMPYADVRQALAADRTRSPYRLSLDGKWRFAYVERPGDRDEDFYKTD
VDDSDWDTIPVPSNWQLHGYDFPIYINITYPWWGPNGLGEEAQPPNAPTRYNPVGQYRRS
FNLPKDWTAGDRRTFLHFEGVKSAHYVWINGELVGYHEDSYDPAEYDITPHLKPGSNQIA
VEVYRYSDGDWLEDQDMIRLSGIFRSVYLYSTPAVHLRDFKLDTPLGDGYTTAELSVTAS
VRAYAAGHEGAYSVETQLYDAGGHAVWSRPLVQSVTVGASATGEDVTVQAARSVPSPELW
SAEHPTLYTAVLQLRDPAGKVVETLSHRVGLREFALRNGLMRINGKPVSLRGTNRHEMHP
DRGMALTRADLVQDMGIIKRLNINSVRTSHYPNNPLWYELADEYGLYLVDETNLETHGIR
DRFPGNDPDWTKACVARARNMVHRDKNHASVVIWSLGNEAGGGSTFVAMRDWIESYDKTR
VIQYEGDDRPTISQIRSEMYDSPQRVEQRAKDTSDTRPYVMIEYSHSMGNSTGNFKKYWD
LVRRYPVLQGGWIWDFVDQSLTWPIPRLKVFTDAGPSKLQGQLLTAAGTFSRDKGLSGAT
GFTRDPALNLTGSLTLEAWFTPHVTGGHQPIIAKGDTHYALKQSEKSIEFFIYGGGQWVS
VSWGLPAEGWTGREHHVAGVFDAGSGSLTLYVDGEVKATRSTTRRPSANVAPLALGTDTD
NPTRELSGTIRRARVYARALSGSELASTGRGAGDEGVRFWFDAATVEVKESRAKDRSFLA
YGGDWGDNPNDGAFVADGIIKADRGHTGKAAEVKRIYQAVHAKPATGTTLASKKVTLTNE
FLFTNLRELDGGWTLVADGRKIQEGRLTRDQLDVGPLSAKDITVPFDLPASPAPGTEYFL
ELSFTTKDSAPWAEAGFEVAREQLSVDAGSPAVTPVPLADVPELTYEESDEAVTVTGKGY
PGRFSVTVDKASGTITSYKAGGNRLISDGPVPNFWRAPTDNDHGNGQHTRNQTWRDAGTN
RKVTSVTVRSLGDDRAVEIKVTGTLPTTTESTYTTTYTVFGNAEIKVDNTLHPGASSLPY
IPEVGTLFLLNRRLERLHYYGRGPEENHWDRNNGTDVGLYSGDIADQWSGYIRPQENGNK
TDVRWAAVTDRNGEGLLVSGDGLIEINASYFTPEDLSTGLRHDYHLTPRDTPVLRVNHRQ
MGVGGDNSWGAHTHDEYKLFANRDYTYTYRLRPLTDVAGATAASRRPTATR
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgccccacccgcacccgcacacaggcacccccgccgcccgccccgtcatgagccgccgc
cgcctgctggagggcggcgccgccctcctcggcgccgtggccctctccggtggcgccgcc
cacgcggccccgctcctcgcgtcgaaggccgacggcacccccgagtggtccggcaacatg
gccctcttccaggtcggcgccgaaccgccgcacaccaccctcatgccgtacgcggacgtc
agacaggctctggccgccgaccgcacccgttccccgtaccggctgagcctcgacggcaag
tggcggttcgcgtacgtcgaacggcccggcgaccgggacgaggacttctacaagacggac
gtcgacgacagcgactgggacaccatcccggtgccgtccaactggcagctgcacggctac
gacttccccatctacatcaacatcacctacccctggtggggccccaacggcctcggcgag
gaggcgcagccgccgaacgcgccgacgcgctacaaccccgtcggccagtaccggcgcagc
ttcaacctgcccaaggactggacggccggcgaccgccgtaccttcctgcacttcgagggc
gtcaagtcggcccactacgtgtggatcaacggcgaactcgtcggctaccacgaggactcc
tacgacccggccgagtacgacatcaccccgcacctgaagccggggtcgaaccagatcgcc
gtcgaggtctaccggtactcggacggcgactggctggaggaccaggacatgatccggctg
agcggcatcttccgctcggtctacctctactccaccccggccgtgcacctgcgcgacttc
aagctggacaccccgctcggcgacggctacaccaccgccgagctgtccgtcaccgcgagc
gtgcgcgcctacgcggccgggcacgagggcgcgtactccgtggagacgcagctctacgac
gccggcggacacgccgtctggtcccgccccctcgtccagtccgtcaccgtcggcgcctcc
gccaccggtgaggacgtgaccgtgcaggccgcccggtccgtgccgtcccccgagctgtgg
tccgccgagcacccgaccctctacacggccgtgctgcagctgcgcgacccggccggcaag
gtcgtcgagaccctctcccaccgcgtcggcctgcgcgagttcgcgctcaggaacgggctg
atgcggatcaacggcaaaccggtctccctgcggggcaccaaccgccacgagatgcacccc
gaccggggcatggcgctcacccgcgccgacctggtccaggacatgggcatcatcaagcgg
ctcaacatcaactccgtgcgcacctcgcactatcccaacaacccgctctggtacgagctg
gcggacgagtacggcctctacctcgtcgacgagacgaacctggagacgcacggcatccgg
gaccgcttccccggcaacgaccccgactggaccaaggcgtgcgtggcccgcgcccggaac
atggtccaccgcgacaagaaccacgcctccgtcgtcatctggtccctcggcaacgaggcg
ggcggcggctccaccttcgtcgccatgcgcgactggatcgagtcgtacgacaagacccgc
gtcatccagtacgagggcgacgaccggccgaccatcagccagatacggtcggagatgtac
gacagcccgcaacgcgtcgagcagcgggccaaggacacctccgacacccggccgtacgtg
atgatcgagtactcgcactcgatggggaactcgaccggcaacttcaagaagtactgggac
ctcgtccggcgctaccccgtcctccagggcggctggatctgggacttcgtcgaccagtcg
ctgacctggccgatcccgcggctgaaggtcttcaccgacgccggcccgagcaagctgcag
ggccaactgctcaccgccgcaggaacgttcagccgcgacaagggcctctccggcgccacc
ggcttcacccgcgaccccgccctcaacctcaccggctccctgacgctggaggcgtggttc
accccgcacgtcaccggcggccaccagccgatcatcgccaagggcgacacccactacgcg
ctgaagcagagcgagaagagcatcgagttcttcatctacggcggcggccagtgggtcagc
gtcagctggggcctcccggccgagggctggaccggccgcgagcaccatgtcgccggtgtc
ttcgacgccggttccgggtccctcaccctctacgtcgacggcgaggtgaaggcgacccgc
agcacgacccggcggcccagcgcgaacgtggccccgctcgcgctcggcaccgacacggac
aacccgacgcgcgaactcagcggcacgatccggcgggcgcgcgtgtacgcccgcgccctg
agcggctccgaactggcctccacggggcgtggcgccggtgacgagggggtgcgtttctgg
ttcgacgcggccacggtcgaggtgaaggagagccgggcgaaggaccgttcgttcctcgcg
tacggcggtgactggggcgacaaccccaacgacggcgccttcgtcgcggacggcatcatc
aaggccgaccggggccacaccggcaaggccgccgaggtcaagcgcatctaccaggccgtg
cacgcgaagccggccaccggcaccaccctggcctcgaagaaggtcacgctcaccaacgag
ttcctcttcaccaacctccgggaactcgacggcggttggacgctggtggccgacggcagg
aagatccaggagggccgcctcacccgcgaccagctggacgtcggcccgctgtccgccaag
gacatcaccgtccccttcgacctccccgcctccccggcccccggcaccgagtacttcctc
gaactctccttcaccaccaaggactccgccccgtgggccgaggccggcttcgaggtggcc
cgggagcagctgtccgtggacgcgggcagcccggcggtgacccccgtcccgctcgcggac
gtcccggagctgacgtacgaggagagcgacgaggccgtcacggtgaccggcaagggctac
ccgggccgcttctccgtcaccgtcgacaaggcgagcggcacgatcacctcgtacaaggcg
ggcggcaaccggctgatctccgacggaccggtgcccaacttctggcgggcccccaccgac
aacgaccacggcaacggacagcacacccggaaccagacctggcgggacgcgggcacgaac
cgcaaggtgacgtccgtgaccgtccgctccctgggcgacgaccgggccgtggagatcaag
gtcaccggcacgctcccgacgaccaccgagtccacctacacgaccacctacacggtgttc
ggcaacgccgagatcaaggtcgacaacaccctgcacccgggcgcctcctccctgccgtac
atcccggaggtgggaaccctgttcctgctcaaccgccgcctggagcgcctgcactactac
ggccgcggccccgaggagaaccactgggaccgcaacaacggcaccgacgtgggcctctac
tccggcgacatcgccgaccagtggtcgggctacatccgcccccaggagaacggcaacaag
accgacgtccgctgggccgccgtcacggaccgcaacggtgagggcctgctggtctcgggc
gacggcctgatcgagatcaacgcctcgtacttcaccccggaggacctgtcgacgggcctg
cgccacgactaccacctcaccccccgcgacaccccggtcctgcgcgtcaaccaccgtcag
atgggagtcggcggcgacaacagctggggcgcccacacccacgacgagtacaagctcttc
gccaaccgcgactacacgtacacgtaccggctgcgcccgctgacggacgtggcgggggcc
acggcggcgtcgaggaggccgacggcgacgaggtag
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integrated database retrieval system