Streptomyces scabiei: SCAB_46421
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Entry
SCAB_46421 CDS
T01187
Name
(GenBank) putative ABC transporter
KO
K16014
ATP-binding cassette, subfamily C, bacterial CydCD
Organism
scb
Streptomyces scabiei
Pathway
scb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SCAB_46421
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scb02000
]
SCAB_46421
Transporters [BR:
scb02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
SCAB_46421
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
RsgA_GTPase
SMC_N
AAA_29
AAA_22
AAA_33
MMR_HSR1
ATP-synt_ab
AAA_16
AAA_18
NACHT
MobB
nSTAND3
TsaE
DUF87
NB-ARC
AAA_24
nSTAND1
APS_kinase
AAA_23
Viral_helicase1
Dynamin_N
T4SS_pilin
EhaL
Motif
Other DBs
NCBI-ProteinID:
CBG71697
UniProt:
C9ZC07
LinkDB
All DBs
Position
5203421..5207023
Genome browser
AA seq
1200 aa
AA seq
DB search
MKPIDPRLLRYARATRGFLMVVVGLGVVGAALVIAQAMLIAEVVVGAFQHGMPVSALRTP
LLLLAAVALGRALVSWLTELAAHRASAAVKSELRGRLLERAAALGPGWLSGQRTGSLVAL
ATRGVDALDDYFSRYLPQLGLAVVVPVAVLARIVTEDWVSAAIIVGTLPLIPVFMVLIGW
ATRAQMDRQWRLLSQLSGHFLDVVAGLPTLKVFGRAKAQAESIKRITGEYRQTTMRTLRI
AFLSSFALELLATISVALVAVTIGMRLVHGEMDLYIGLVVLVLAPEAYLPVRQVGAQFHA
AAEGLAAAEEIFEVLETSVPSSGTGAVPSAGDLHFDRVTVRYSGRPYDAVSDVSFTVGSG
ETVALVGPSGAGKSTLLNVLLGFTQVASGGVRVGGSDLSSLDLDTWRSRIAWVPQRPHLF
AGSIAENVRLARPDADDAAVRRALGDAGALGFVDALPAGAGTVLGEDGAGLSAGQRQRLA
LARAFLADRPVLLLDEPTASLDGETEAEVVEAVRRLSAGRTVLLVVHRPALLDVADRVVR
LEGRAAERASESGVSGGTVVRAVGTGAGGTATAARDSVDAAGTGAGPRAGTGAGAGAAGA
GPGAGSAEARSGVTSGASSLSVLGRVRAMAGPRRGRLALALLLGSLALGSAVGLMATSGW
LISRASQQPPVLYLMVAVTATRAFGIGRAVFRYAERLVSHDTVLRMLADTRVAVYRRLER
LAPAGLRTTRRGDLLSRLVADVDALQDYWVRWLLPAGAAAVVSAASVGFTAWLLPEAGAA
LAVGLLAAGAGVPLVTGAVARRAEHRLAPSRGVLATRVADLLTGTAELTVAGALPARTAA
ARKADQVLTRIASRAATATALGDGLTALVSGLTVAVTAFFGAQAVAAGRLSGVAMAVVVL
TPLASFEAVLGMPLAVQFRQRVRRSAERVYEVLDAPEPVREPVEPAGAPVSPFPLRLAGL
GARYAGQDRDALADLDLTLEQGRRVAVVGVSGAGKTTLAQVLLRFLDARAGTYTLGGVDA
HTLEGDVVRRFVGLCAQDAHLFDSSVRENLLLARKGASEAELRDALARARLLDWVDGLPD
GLDTLTGEHGARLSGGQRQRLALARALLADFPVLVLDEPAEHLDLPTADALTADLLAATE
GRTTVLITHRLAGLDAVDEVVVLAEGRVVQRGSYAELVVVEGPLRAMAEREAAGELLARA
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccgatcgacccacgactgttgcggtacgcgcgcgccactcgcggattcctgatg
gtggtcgtcggcctgggtgtcgtcggggcggcgctggtcatcgcacaggccatgctcatc
gcggaagtggtggtcggcgccttccagcacgggatgccggtcagcgcgcttcgcaccccc
ttgctgctcctggcggcggtcgctctggggcgggccctggtctcctggctcaccgagctg
gcggctcatcgcgcgagtgcggcggtgaagtcggagctgcgggggcggctgttggagcgg
gccgccgcgctggggcccggttggctgagtgggcagcgcaccggctcgctcgtcgccctc
gccactcgtggggtcgacgcgctcgacgactacttctcgcgctatctgccgcagttgggc
ctcgcggtcgtcgttcccgtcgcggtcctcgcgcggatcgtcaccgaggactgggtgtcg
gcggcgatcatcgtcggcaccctgccactgatcccggtcttcatggtgctcatcggctgg
gccacccgtgcgcagatggaccgccagtggcggctgctgtcacagctgtcgggacacttc
ctggacgtcgtcgccgggctgccgacactgaaggtgttcggtcgggccaaggcccaggcc
gagtcgatcaaacggatcaccggcgagtaccgccagacgaccatgcggacgctgcggatc
gcctttctctcgtccttcgccctggaactgctcgcgacgatctcggtcgcgctggtcgcg
gtcaccatcggcatgcggctcgtgcacggcgagatggacctctacatcgggctggtcgtc
ctcgtgctggccccggaggcgtatctgccggtccggcaggtgggtgcccagttccatgcg
gcggccgaggggctcgcggcggccgaggagatcttcgaggtcctggagacgtcggtgccg
tcgtccgggaccggggcggtgccgtccgccggtgacctccacttcgaccgggtgaccgtc
cgctactccgggcggccgtacgacgccgtctcggacgtgtccttcaccgtgggctcaggt
gagacggtggccctcgtagggccgagtggcgcggggaagtcgacgctgctgaacgtgctg
ctggggttcacgcaggtcgcgtcgggtggggttcgggtcggggggagcgacctctcctcg
ctcgacctggacacatggcgttcgcgtatcgcctgggtgccgcagcggcctcatctgttc
gccgggtcgatcgccgagaacgtacggctggcccgtcctgacgcggacgacgctgccgtg
cggcgggcgctcggcgacgcgggggcgttggggttcgtggacgcgctgcctgccggggcc
gggacggtcctcggtgaggacggcgccggtctctccgccgggcagcggcaacggctcgcc
ctcgcccgtgcgttcctcgccgaccggcctgtgctgctgctcgacgaaccgacggcctcg
ctggacggagagaccgaggccgaggtcgtggaggcggtacggcgtttgtcggcgggacgg
accgtgctgttggtggtccaccggccggctctgctggacgtggcggaccgcgtggtgcgg
ctggaggggcgggcggccgagagggcgtccgagtccggcgtctccggtggcacggtcgtg
cgggccgtcggcacgggggcgggcgggacagcgaccgccgcacgtgactccgtggacgct
gcggggaccggggccggaccgagggcaggaaccggggctggggcgggggccgccggggcc
gggccgggggccgggagcgccgaggctcgctccggagtgacgtccggggcctcctcgctg
tccgtactcggccgtgtccgcgccatggccgggccgcgccgtggccggctcgccctggcc
ctgctgctcggcagcctcgcgctgggcagtgccgtgggtctgatggcgacgtcggggtgg
ctgatctcacgggcctctcagcagcctccggtgctgtacctgatggtcgcggtgacggcg
acgcgggcgttcgggatcggacgggcggtgttccggtacgcggagcggctggtgtcgcac
gacaccgtgctgcggatgctggccgacaccagggtggccgtctaccgccgcctggagcgg
ctggcgcccgccgggttgcggacgacccggcggggcgacctgctctcgcgactggtcgcc
gatgtggacgccctgcaggactactgggtgcgctggctgcttccggcgggggccgcggcg
gtggtctccgcggcgtcggtcgggttcacggcctggctgctgcccgaggccggagccgca
ctcgccgtcgggctcctcgcagccggggccggagtgcccctcgtcacgggggccgtggcc
cggcgggcggagcaccggctggctccgtcgcgcggggtcctcgccacccgggtggccgat
ctgctcaccggtaccgccgagttgacggtcgcgggtgccctgcctgcgcgcacggccgcg
gcacggaaggccgaccaggtgctcacccggatcgcgtcccgggccgccaccgccaccgcg
ctcggcgacggtctcacggcgctcgtctccggtctcaccgtcgccgtcaccgcattcttc
ggggcacaggctgtcgccgccgggcggctgagcggtgtggccatggccgtggtcgtgctc
accccgctggcctccttcgaggcggtgctcgggatgccgttggcggtgcagttccgccag
cgggtgcgcaggagcgcggagcgggtgtacgaggtgctggacgcccccgaacccgtacgc
gagccggtggagccggccggggcgccggtgtcgccgttcccgctgcggctggcagggctc
ggcgcgcggtacgccgggcaggaccgggacgcgctcgccgacctggacctcaccctggaa
caggggcgcagggtcgccgtggtcggtgtctcgggagccggcaagaccacgctcgcacag
gtgctgttgcgtttcctggacgcgcgggcagggacgtacacgttgggtggagtggacgcg
cacacgctcgaaggggacgtcgtacggcggttcgtggggctctgcgcccaggacgcgcac
ctcttcgacagttcggtgcgggagaacctgctgctcgctcggaagggcgccagcgaggcg
gagctgcgggacgcgctcgcgcgggcccgcctgctcgactgggtcgacggactgccggac
gggctggacaccctgaccggtgaacacggggctcggctgtccggcggtcagcgtcagcga
ctcgccctcgcccgcgcgctgttggccgactttcccgtcctcgtcctcgacgagcccgcg
gaacacctggacctgccgaccgccgacgcgctcaccgctgacctcctggccgcgaccgag
ggtcgtacgacggtgctgatcacccatcggctggccgggctggatgccgtggacgaggtc
gtcgtgctggcggaagggcgcgtcgtgcaacgcgggtcctacgcggaactggtcgtggtg
gaggggcccttgcgggcgatggcggagcgggaggccgcgggagagctgttggcacgggcc
tga
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