Streptomyces scabiei: SCAB_47101
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Entry
SCAB_47101 CDS
T01187
Name
(GenBank) putative bifunctional sensor kinase/response regulator
Organism
scb
Streptomyces scabiei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_8
Diguanyl_cycl_sensor
Response_reg
PAS_7
HisKA
Motif
Other DBs
NCBI-ProteinID:
CBG71764
UniProt:
C9ZC72
LinkDB
All DBs
Position
complement(5279918..5284912)
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AA seq
1664 aa
AA seq
DB search
MSSRPSRGAARLAAILDALPDALVLVNANGTVVNANTIALEAFETPGTALVGRGLLDLLP
EFDSRLIPGSMRRPDTMDPTGRTKPTRMTARRTDGSEFPVEVTSANLENGQQAYDGYGYT
NDELLMLVVRDLSGTVDTEAELARSQRQTEMILRAASEGVVGTDTDGRIVLVNPAAAQIL
GYRASDLGGRELHTLVLHSREDGAPFPYGESPLADTLRSGRKHRVRGQVLWSKNGEKVSV
DLTTAPVRDGDQLVGAVMTFTDRRPYDKLAEEKDSEAETHAEELERLAKEHAEELAGVRE
EHAAELAELSEQHAEELAAGDERYAALGEREKDRYEALAARHEQLLAVLGTSLRGPLDQL
RSELGTLAADDAGQLWPEANQVLHHLTAGYSRITTLIDNVLGYQRIDAGEDGLVRTAVML
DAVVAAGVDGAVELIGPGRVQFAVHAPPIEAEVDQVRLATALAHLVADVAGVDATGNTPV
SAGGYMDNTVVVAAAQRGEVVRIEVRGPYAGGDPVHQPIVRGIVRAHGGVLQTVEVPGMS
GSAYVLEVPLGGGAGAVPAAPLPAVVGAEVASGAPAGGAEVALPEQAAAGGGRRRARRSS
VDAFLESEDAPEAGGPEAAVAPTGRRRRRAEDAAVAIAAAGAADGGAEGLGVTAQPVAAE
GAVVTAAEHAAGAAAAASGLGGTVPPQGVPAPGGRRARREPAAAQNALPPAALPAGQSTG
SEVSVADAGSRPGTAGSDAADAGGAQQPTGRRRRALASAEERAAAPEPGARAVFALPPAE
ADRGPEYAQAAGLGPVPLPAGAGAPGAPMPMPMPLPLPAGTTAPVQGEGAPGVGVAGGQA
TPAAAGQPAPGGQPVPAAGLVPAGVPVQAGGVAGPGVGQVPGMGQVPGTPGVAQVPGVAQ
GPVAGQGAGVPAGGVDDGRHDAAPHQAADDHTPPQPHPIPTPTGRRRAVRQAAPQQGDGV
AMTAPAPGVPVQGAPAQGIPPQSGPAQQVPAQGVAPVVAQPVAAQPALAQNIPNVPNIQG
APQPVPLQGVQAVPQQVPGQGVAAAPGQPVAPQGVPGSAAQAAVGQALAARAVGGQAPAG
QAAPGQPGVGQPAPAQGTVPPRQEVPGAQPAQGVAQPVPAAGVPGAQQAVPAQGAAPGTP
QPQSWPDARHETSGVGIPVAAPQAPLPPQSTPSSGTPLPPEVAVQQPRAAQPLPAEAMAP
APAPAPAPTPAQAQRQAQAQAPAPATPAAPAPAPAAAPLDSNSTHGRAISVRTLGQGVPF
SRQGGPQAQAQAQGGATPTPHQPGGSGRRRKLGTPPQPTGDRPETAARPHPQSSPTNGTG
FRIGTGQAPPPAQPQQAAAQVSQPSLAGQVPLPPQPSLAGQVPLPQQPSLAGQSRLTGRT
EGAGRSYAIGAPDENADEGPEPLDGPGGAVEVPDRPHPQPMDDELPPEPLDNPRRLLVWP
APDAATHQALSDRGYRPVIVNSREDVDAQIAAYPAALFVDPLTGPITRTALQSLRQAAVA
AEVPVLVTAGLGQATREAAYGADPAVLLKALAPRDSEQHPPRVLLIEEHAEIALALTATL
ERRGMQVARAASDADAVTLAAQMRPNLVVMDLLQVHRRQAGIIDWLRTNGQLNRTPLVVY
TAAVDPSELPRLASGETVLFLAERSTSTDVQTRIVDLLARVGTN
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaggccatcccgaggcgctgctcgcctcgcagccatactggacgcgctgccc
gacgcgttggtgctggtcaacgccaatgggaccgtcgtcaacgccaacacgatcgcgctc
gaggccttcgagacccccgggaccgcgttggtcggacgcggtctgctggacctgctcccc
gagttcgactcccggctcatcccgggctccatgcggcgccccgacaccatggacccgacc
gggcggaccaagccgacccggatgaccgcccgccggaccgacggcagcgagttcccggtc
gaggtcacatccgcgaatctggagaacggccagcaggcgtacgacggttacggctacacc
aacgacgagctgctcatgctggtcgtacgggatctttcgggcaccgtcgacaccgaggcc
gaactcgcgcgttcgcaacggcagaccgagatgatcctgcgggccgcgtccgagggcgtg
gtcgggacggacacggacgggcggatcgttctcgtcaatccggccgccgcgcagatactg
ggttaccgggccagtgacctcggcggacgcgagctgcacacgctcgtgctgcactcccgc
gaggacggcgcccccttcccgtacggcgagtcgccgctcgcggacaccctgcggtccggg
cgcaagcaccgggtgcgcgggcaggtgctgtggtcgaagaacggcgagaaggtgtcggtc
gacctgacgaccgcgccggtgcgtgacggggaccagctcgtcggcgcggtgatgacgttc
accgaccggcggccgtacgacaagctcgccgaggagaaggactccgaggccgagacgcac
gcggaggagctggagcggctcgccaaggagcacgccgaggaactggcgggcgtccgggag
gagcacgccgccgaactggccgagctgagcgagcagcacgccgaggaactcgccgccggc
gacgagcggtacgcggcgctcggcgagcgtgagaaggaccgctacgaggcgctggccgcg
cggcacgagcagctgctcgccgtgctgggcacctcgctgcgcggtccgctggaccagctc
cgcagcgagctgggcacactcgccgccgacgacgccgggcagctgtggcccgaggccaac
caggtgctgcaccacctgaccgccgggtactcgcggatcacgaccctcatcgacaacgtg
ctcggctaccagcggatcgacgcgggcgaggacggcctcgtccgtacggccgtgatgctg
gacgcggtcgtcgcggccggtgtcgacggggccgtggagctgatcgggccggggcgggtg
cagttcgccgtgcacgcgccgcccatcgaggccgaggtggaccaggtgcggctcgcgacc
gcgctcgcgcacctcgtcgccgatgtggccggtgtggacgcgacgggcaacacgcccgtg
tccgccggcgggtacatggacaacaccgtggtggtcgcggccgcgcagcgcggtgaggtc
gtccgtatcgaggtgcgcgggccgtacgccgggggagacccggtgcaccagccgatcgtc
cggggaatcgtccgggcgcacggcggtgtgctgcagacggtcgaggtgccggggatgagc
ggcagcgcgtatgtgctggaggtgccgctcgggggcggcgccggggccgtgcccgccgcc
ccgttgcccgcggtggtgggcgccgaggtcgcttccggtgcccccgcgggcggcgccgag
gtcgccctgcccgagcaggccgccgccggtggcgggcgcaggcgggcgcggcggtcgtcg
gtggacgccttcctggagagcgaggacgcccccgaggccggagggcccgaggccgccgtc
gcccccaccgggcggcgcaggcgcagggccgaggacgcggcggtcgcgatcgccgcggcc
ggtgcggctgacgggggcgctgaggggctcggtgtcaccgcacaacccgtggccgccgag
ggcgcggtcgtcacggcggccgagcacgcggcgggagccgctgccgccgccagcggactg
gggggaacggtgccgccgcagggtgtgcccgcgcccggcgggcggcgcgcgcgccgggag
cccgccgccgcgcagaacgccctgccgccggccgcgctgcccgcggggcagagcaccggc
agtgaggtgagcgtcgccgacgcgggttcccgtcccggtaccgccggctccgatgccgct
gacgcggggggcgctcagcagcccaccgggcgccggcgtcgggctctggccagtgcggag
gagcgtgccgccgcgcccgagccgggcgcgcgtgccgtcttcgcgctgccgccggccgag
gccgaccggggacccgagtacgcgcaggcggccgggctcggtccggtacctctgcccgcc
ggggcgggtgcgcccggcgcgccgatgcccatgccgatgccgctgccgctgcccgccggc
accaccgcgcccgtgcagggcgagggtgctccgggcgtgggcgtcgcgggcggccaggcg
accccggccgctgcggggcagcctgcgcccggtggacagccggttcccgccgccggactc
gtaccggcgggcgtgcccgtacaggccgggggagtcgcggggccgggtgtgggtcaggtc
ccgggtatgggtcaggtcccgggtacgcccggcgtggcgcaggtacccggcgtggcacag
ggccccgtcgcgggtcagggcgcgggcgtgcccgccggtggtgtcgacgacggccgtcat
gacgccgccccgcaccaggcggccgacgaccacaccccgccgcaaccgcacccgatcccc
acaccgaccggccgtcgccgagcggtccggcaggccgctccccagcagggtgacggcgtg
gccatgacggctcccgcacccggggtgccggtccagggtgccccggcgcaggggattcct
ccgcagagcggcccggcgcagcaggtgcccgcccagggcgtggcgccggtcgtcgcgcag
cctgtcgccgcgcagcccgccctcgcccagaacatcccgaacgtcccgaacatccagggc
gccccgcagcccgtacccctgcagggcgtgcaggccgtcccgcagcaggtgcccggtcag
ggcgtcgccgctgctcccggacagcccgtcgctccgcagggcgtaccggggagcgcggcc
caggcggccgtgggacaggctctcgccgcccgggcggtcggcggtcaggcccctgccggc
caggccgcccccggacaaccgggcgtcggacagcccgcccccgcgcagggcaccgtcccg
ccgcggcaagaggtccccggggcgcagccggctcagggcgtcgcccagcccgtgcccgcg
gcaggcgtgcccggcgcccagcaggccgtccccgctcagggcgcggctcccggcacgccc
cagccgcagtcctggcccgacgcccgccacgagacctccggcgtcggcatccccgtcgcc
gctccgcaggcgccgctgcccccgcagtccaccccctcctcgggcaccccgctgccgccg
gaggtggccgtacaacagccgcgcgccgcacagccgttgcccgccgaagccatggccccg
gctccggctccggctccggctccgactccagctcaggcgcagcgacaggcacaggcccaa
gccccggccccggccactccggcggcaccggcaccggcccctgccgccgctcccctcgac
tccaactccacccatggacgggcgatcagcgtacggacgctcggccaaggcgtcccgttc
tcccgccagggcggcccgcaggcacaggcgcaggcgcagggcggagccacgcccactccc
caccagcccggtgggtcgggccgtcgccgcaagctggggaccccaccgcagccgaccggc
gaccgccccgagaccgccgcgcgcccgcacccgcagtccagcccgacgaacggcaccggt
ttccgcatcggcaccggccaggcgccgcccccggcccagccgcagcaggccgccgcacag
gtgtcccagccgtcgctcgccgggcaggtcccgctgcccccgcagccctccctcgccggc
caggtcccgctgccgcagcagccgtccctcgccgggcagtcccggctgacgggccgtacg
gagggtgccggacggtcgtacgccataggggcgcccgacgagaacgcggacgaaggtccc
gagccgctcgacgggcccggcggtgcggtggaggtccccgaccgtccgcatccgcagccg
atggacgacgagttgccgccggagccgctggacaacccacggcggctgctggtgtggccc
gcgccggacgcggcgacccaccaggcactgagcgaccgcggctaccggcccgtgatcgtg
aactcccgcgaggacgtggacgcccagatcgccgcctacccggccgccctgttcgtcgac
ccgctgaccgggcccatcacgcgcacggcactgcagtccctgcgccaggccgccgtggcc
gccgaggtccccgtactcgtgacggcggggctcggccaggcgacacgggaggcggcgtac
ggtgccgacccggccgtactgctgaaggcgctggcgccacgcgactccgagcagcatccg
ccgcgcgtcctgctcatcgaggagcacgcggagatcgcgctcgccctcaccgcgacgctg
gagcggcgtggcatgcaggtcgcgcgggccgcgtccgacgcggatgccgtcacgctggcc
gcgcagatgcgacccaacctggtggtgatggacctgctgcaggtgcaccgccgccaggcc
ggaatcatcgactggctgcggacgaacggccagctgaaccgcacgccgctcgtcgtctac
accgccgccgtcgacccgtccgaactcccgcgcctggcctcgggggagacggtcctgttc
ctcgcggaacgctcgacgagcacggacgtgcagacccggatcgtggacctgctggcacga
gtcggcacgaactga
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