KEGG   Streptomyces scabiei: SCAB_47291
Entry
SCAB_47291        CDS       T01187                                 
Name
(GenBank) SigF-like sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
scb  Streptomyces scabiei
Brite
KEGG Orthology (KO) [BR:scb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scb03021]
    SCAB_47291
Transcription machinery [BR:scb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SCAB_47291
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_Crp_2 GerE MarR_2 NirdL-like_HTH MarR HTH_3 DUF7343 DUF134
Other DBs
NCBI-ProteinID: CBG71782
UniProt: C9ZDK8
LinkDB
Position
complement(5305914..5306777)
AA seq 287 aa
MSASTAPPQEEVPAPEPTSAQVTAQATAPAPEKRRGADTRALTQVLFGELKHLAPGTPEH
NRVRGALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPDRGVQFPTFAM
PTVIGEIKRYFRDNVRTVHVPRRLHELWVQVNSATEDLTTAFGRTPSTAEIAERLRITEE
EVLSCIEAGRSYHATSLEAAQEGDGMPGLLDRLGYEDPELDGVEHRDLVRHLLVQLPERE
QRILLLRYYSNLTQSQISAELGVSQMHVSRLLARSFARLRSANRIEA
NT seq 864 nt   +upstreamnt  +downstreamnt
gtgtcggccagtactgcgcctccccaggaagaagtcccggctcccgagccgacgtcggcc
caggtcaccgcccaggccaccgcgcccgccccggagaagcgccgcggcgccgacacccgg
gccctcacccaggtgctgttcggcgagctgaagcatctggcgccgggcaccccggagcac
aaccgcgtgcggggggcgctcatcgaggcgaacctcccgctcgtgcgctacgcggccgcc
cgcttccgctcccgcaacgagcccatggaggacgtcgtccaggtcgggaccatcgggctg
atcaacgccatcgaccggttcgacccggaccgcggcgtgcagttcccgaccttcgcgatg
ccgaccgtcatcggggagatcaagcggtacttccgcgacaacgtccgcacggtccacgtc
ccccgccggctgcacgagttgtgggtccaggtgaacagcgcgaccgaggacctcaccacc
gcgttcgggcgcaccccctccaccgccgagatcgccgaacggctgcgcatcaccgaggag
gaggtcctgtcctgcatcgaggcgggccgctcctaccacgcgacctcgctggaggccgcc
caggagggcgacggaatgccgggactgctcgaccgcctcggctacgaggacccggagctg
gacggggtcgaacaccgcgacctcgtacggcatctcctcgtccagctgcccgagcgcgag
cagcggatcctgctgctgcgctactacagcaatctgacgcagtcgcagatcagcgccgag
ctgggagtctcccagatgcatgtgtcccggctgctggcccggagcttcgcacggctgcgc
tcggccaaccggatcgaggcgtag

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