Streptomyces scabiei: SCAB_52311
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Entry
SCAB_52311 CDS
T01187
Name
(GenBank) putative D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
scb
Streptomyces scabiei
Pathway
scb00550
Peptidoglycan biosynthesis
scb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SCAB_52311
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scb01002
]
SCAB_52311
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scb01011
]
SCAB_52311
Enzymes [BR:
scb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SCAB_52311
Peptidases and inhibitors [BR:
scb01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
SCAB_52311
Peptidoglycan biosynthesis and degradation proteins [BR:
scb01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SCAB_52311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Motif
Other DBs
NCBI-ProteinID:
CBG72266
UniProt:
C9YV70
LinkDB
All DBs
Position
5816355..5819357
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AA seq
1000 aa
AA seq
DB search
MAGTSPDRSKRYESSTEATTGNEPPVRDTPGPAKPSPDPRLAMSRDAAPKPDQATAVFSR
RSLAGTTEAGTGRDADEAGADEADAAAAVPAGADAGSGDSDAGSSDAGSSESSDADAVAD
GDEDGDGDGDAGDGGVGDRLVDAGSDAGSSRPAADTASESRSDDASSEADSVDDEGSGDA
VKAPHSSAQAPADSDEAEDGQDGQDGQDGGEERHREETLGSEPAAGAGEGARSAANEPGA
ADEARTDEPGAEHDDADSRDRGTDEPAPAATAARLPGARAGEESDRAAAARTDADAEGET
APDADADADADADADADADADTGTGIGTGTGAGVKGKAEAAPRSPRTGDDSKTTTLRVPA
AAVRAEPEDAVVAGAAGDAHPEDARPAAADEVEDRSSDVPPATDGTVHLTADARPGAVAD
DDEPEAADDESRAGGKPEGKGEAAAEAKQAVDQPTAVFRAPRPPAVDQPTTMLKLGGAAA
PKATEPAARADADAEPDSTDRAGTDAEPAGKALADPPAPSERTSKFVALKPLDEHAPAKP
PAAAPDGPAVPPAEATRAIPQVGPERTTQQPLPPKPPLDLLAELTNTPPPRQTPVRTFIR
RVKIWTPLAILLVIVFAVAQSLRPLPAPALALTADESYAFKGGKVDLPWPAEGQGWMDVN
GIGTMDSFGEQKPVAIGSVAKAMTAYVILKDHPMKPGEKGKTITVDAKGETEGGYDKDGE
STLNTVKEGDELSQYDAIAAIMIPSANNIARLLARWDSKGSEKAFVKKMNAAAKDLGMKN
TTYTDPSGLKETTVSTAEDQVKLGNALVRMKALTDITKLPTWVDPSGKKWDNYNRLVPYN
NAIGIKTGSTTAAGGNLLFAATQEVGGETAIVVGAVLGQHTPPIIDTVNAVSKTAMIAAQ
DALTSDTILKKGDVVGHVDDGLGGRTPVVVTKNVSAVGWAGKTVRLELDADATIPHEAKP
GTVVGSLIVGNGIGDGVKVPVALQETLTEPGFLTKLTRVS
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
gtggcgggcacgtcccccgacaggtcgaagcggtacgagtcgtcgacggaggcgacaacg
gggaacgagccaccggtccgggacacccccggccccgcgaagccgtcccccgacccacgc
ctcgcgatgtcccgggacgccgccccgaagcccgaccaggcgacggcggtgttctcccgc
cgctccctggccgggacgacggaggccgggaccggccgcgacgcggacgaggccggtgcg
gacgaggccgatgcggccgctgccgtgcctgcgggtgccgatgcgggttccggcgactcg
gacgccgggtcttcggacgccgggtcttcggagtcttcggacgcggacgcggtcgcggat
ggggatgaggacggggacggggacggggacgcgggtgacgggggcgtcggcgacaggctc
gtcgacgccggctcggacgccggttcgtcccgccctgccgcggacaccgcgtccgagtcc
cgctccgacgacgcttcgtcggaggccgactccgtcgacgatgagggctccggcgacgcc
gtgaaggccccgcacagctccgcgcaggcccccgccgactccgacgaggcggaggacggc
caggacggccaggacggccaggacggcggagaggagcggcaccgggaggagaccctcggg
agcgagcctgccgccggagccggtgagggcgcccggagcgcggcgaacgagcccggggcc
gccgacgaggcccggacggacgagcccggcgccgagcacgacgacgccgactcacgtgac
cgcggtaccgacgagcccgcccccgccgccacggcggcccgcctgcccggcgccagggcg
ggggaggagagcgaccgcgccgccgccgcgcgtacggacgcggacgcggagggcgagacc
gccccagacgcagacgcagacgcagacgcagacgcagacgcagacgcggacgcggacgcc
gataccggcaccggcatcggcaccggcacgggggccggcgtcaagggcaaggccgaggcc
gccccccggtctccccgtaccggcgacgactcgaagacgaccacgctccgcgtgcccgcc
gcagccgtgcgggcggagccggaggacgcggtcgtcgccggtgccgcgggcgatgcgcac
cccgaggacgcgcgtccggctgccgccgacgaggtggaggaccgttcctccgacgtgccc
cccgcgaccgacggcacggttcatctcaccgccgacgcgcgccccggcgcggtcgcggac
gacgacgagccggaagccgccgacgacgaaagccgtgcgggcgggaagcccgagggcaag
ggcgaggccgcggccgaggcgaaacaggccgtggaccagccgaccgccgtcttccgggct
ccccggccccccgccgtggaccagcccaccaccatgctcaagctgggcggcgccgccgcc
cccaaggccaccgaacccgccgcccgggccgatgccgacgccgagcccgacagcaccgac
cgggccgggaccgacgccgagcccgccgggaaggccctcgcggatcccccggccccgtcc
gagcgcaccagcaaattcgtcgccctgaagcccctggacgagcacgccccggccaagcct
ccggccgccgcgcccgacgggcccgccgtccccccggcggaggcgacgcgggccatcccg
caggtcggccccgagcggacgacacagcagccgctgccgccgaagccgccgctcgacctg
ctggccgagctgaccaacaccccgccgccgcgccagactcccgtgcggacgttcatccgc
cgggtcaagatctggacccccttggcgatcctgctggtgatcgtgtttgcggtagcacag
tccctgcgtccgctgcccgcccctgccctcgccctgaccgcagacgagtcgtacgcgttc
aagggcggcaaggtcgacctgccgtggcccgccgagggccagggctggatggacgtcaac
ggcatcggcacgatggacagcttcggcgagcagaagcccgtggccatcggctccgtcgcc
aaggcgatgaccgcgtacgtcatcctcaaggatcacccgatgaagcccggtgagaagggg
aagacgatcaccgtcgacgccaagggcgagaccgagggcggttacgacaaggacggcgag
tcgaccctcaacaccgtcaaggagggcgacgagctctcccagtacgacgcgatcgcggcc
atcatgattccgtccgcgaacaacatcgcgcggctgctggcccgttgggacagcaagggc
tcggagaaggcgttcgtcaagaagatgaacgccgccgccaaggacctcgggatgaagaac
acgacgtacaccgacccctccgggctgaaggagacgaccgtctccaccgccgaggaccag
gtcaagctcggcaacgcgctggtgaggatgaaggccctcaccgacatcaccaaactgccc
acctgggtcgacccgtcgggcaagaagtgggacaactacaaccgtctcgtcccgtacaac
aacgccatcggcatcaagaccggctccaccaccgccgccggcggcaacctcctcttcgcg
gccacgcaggaggtcggcggtgagacggcgatcgtcgtcggcgcggtgctcggccagcac
accccgccgatcatcgacacggtcaacgcggtcagcaagaccgcgatgatcgccgcccag
gacgcgctgacctccgacaccatcctgaagaagggggacgtcgtcggacacgtcgacgac
gggctcggcggccggaccccggtcgtggtcacgaagaacgtctcggcggtcggctgggcc
ggcaagaccgtgcggctcgaactcgacgcggacgcgaccatcccgcacgaggcgaagccg
gggaccgtggtcggatcactgatcgtcggaaacggcatcggtgacggggtgaaggtaccg
gtcgccctccaggaaacgctcaccgaacccggcttcctcaccaagctgacccgagtgagc
tga
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