Streptomyces scabiei: SCAB_5881
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Entry
SCAB_5881 CDS
T01187
Name
(GenBank) probable LysR-family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
scb
Streptomyces scabiei
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scb03000
]
SCAB_5881
Transcription factors [BR:
scb03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SCAB_5881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
DUF6627
MarR_2
DUF4075
HTH_Tnp_ISL3
HTH_30
Motif
Other DBs
NCBI-ProteinID:
CBG67784
UniProt:
C9YVN6
LinkDB
All DBs
Position
656962..657888
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AA seq
308 aa
AA seq
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MEATTLRQLAAYTAVARAASFTAAAAEMHVSQSSLSRAVADLERQLGVQLLERDTRNVQL
TAAGVEALRVAEQIVTAHRAGMRELRRYLLGESGAVAVATLPSVAAVLLPRVISAFRERR
PQVAVRLLDGLERSVLERVLSGDADFALTTVGNPPEQLEHRPLVRDRFVAVLPQGHPLAD
RQEITWEELAGQPFLAVGRDSSVRRLTDAAFAQIDAHAAPAAEAGSVATVGGLVTAGLGV
SAMPALVLPLMGAGPVVCRPLVDPVVDRRLDIALRARRTLPAVTERFLETLEEFRLRRDP
LPPGVSWA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaggccaccaccctgcgtcaactggcggcgtacaccgccgtcgcccgggccgcgagc
ttcaccgcggcggccgcggagatgcacgtgtcgcagtcctcgctcagtcgcgcggtcgcg
gacctggagcggcagctgggtgtccagctcctggaacgcgacacccgcaacgtgcagttg
accgcggcgggcgtggaggcgctgcgagtcgccgagcagatcgtcaccgctcaccgggcg
ggcatgagggagctcaggcgctacctgctcggggagtcgggagcggtcgccgtggccacc
ctcccctcggtcgccgccgtgctgctgccccgggtgatctccgccttccgcgagcgccgg
ccccaggtcgcggtacgcctcctggacggcctggagcggtcggtgctggaacgggtcctg
tccggcgacgcggacttcgcgctcaccaccgtcgggaaccctccggagcagttggagcac
cgccccctggtccgggaccgcttcgtcgcggtgctgccgcagggccacccgctcgccgac
cgacaggagatcacctgggaggagctggccgggcagccgttcctggccgtcggccgcgat
tcgagcgtgcggcggctcaccgacgcggcgttcgcccagatcgacgcacacgcggcgccg
gcggccgaggcgggcagcgtcgcgaccgtgggcggactggtgaccgccgggctgggcgtg
tcggccatgcccgcgctcgtgctgccgctgatgggtgccgggcccgtcgtctgccgtccg
ctggtggaccccgtcgtggaccggcgtctggacatcgcgctgcgcgcccggcgcacgctc
ccggcggtgacggaacggttcctggagacgctggaggagttccgcctccgccgggacccc
ctgccgcccggcgtctcctgggcctga
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