Streptomyces scabiei: SCAB_6041
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Entry
SCAB_6041 CDS
T01187
Name
(GenBank) putative SecDF protein-export membrane protein
KO
K12257
SecD/SecF fusion protein
Organism
scb
Streptomyces scabiei
Pathway
scb02024
Quorum sensing
scb03060
Protein export
scb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SCAB_6041
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SCAB_6041
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCAB_6041
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
scb02044
]
SCAB_6041
Secretion system [BR:
scb02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SCAB_6041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
SpoIIIAH
Motif
Other DBs
NCBI-ProteinID:
CBG67799
UniProt:
C9YVQ1
LinkDB
All DBs
Position
complement(677628..679886)
Genome browser
AA seq
752 aa
AA seq
DB search
MTRAPRVRGLLALAAVALSVFIALTTPVQLGLDLRGGTQIVLETRPTDTTPADSEATDRT
LEVLRGRIDALGVAEPTLTRSGDNRIVVELPGVQDPAEAAEVLGRTARLTFHQVLGTTTA
DATDKNADRAEEKEQAKEEKRKLGDTVLADESGTLLRLEAAALTGQDVKEAAARLDQQNG
TGWHVTLDFEGAGGDGWARLTGRAACAPAGDPARRVAIVLDDKIISSPQIDPSVRCETGI
SGGSTQITGSFGADEAKELALLINGGALPVPVENVEQRTVGPTLGAEAIEASAWAAAVGT
TLTALFIIAVYRLMGVLATVALLCYGLISYAALAALGATLTLPGLAGFVLAIGMAVDANV
LVFERAREEYAAQRRPSPRSALTAGFRGAFSAITDSNVTTLIAAGLLFFLASGPVRGFGV
TLGIGVLASMFSALVITRVLADHAAFRPSVRRRPRLTGIARTGAVRDRLTRTPPQLMRRP
RRWLAASAVVLAVAVAGIGVRGLDFGIEFTGGRLVEYTTTPVDPDRARAALADAGFPRAV
VQTSGDNGLTVRTERLSEAQAAAVTDTVGTLTDRADKVRDEAIGPSLGKELRNGALIALA
VALGAQLLYLAARFRWLFGTSAVAALAHDVVILVGVFAWLGKPVDGVFLAALLTVIGYSV
NDSVVVFDRVRDLGRVDRAAPFAAVANRALLQTLPRTVNTGMGAAFILTALAVLGGDSLT
DFALALLIGLAVGTYSSMFTATPLAVELHRRR
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
ttgacccgcgccccgcgcgtccgagggctgctcgccctcgccgccgtcgccctgtccgtc
ttcatcgccctcaccacacccgtccagctcggactggatctgcggggcggcacgcagatc
gtgctggaaacccgccccaccgacaccacccccgccgacagcgaggccaccgaccgcacc
ctggaggtgctgcgcggccgcatcgacgccctgggcgtcgccgaacccaccctcacccgc
tccggcgacaaccggatcgtcgtcgagctgcccggagtgcaggacccggccgaggccgcc
gaggtcctcggccgcaccgcccggctcaccttccaccaggtcctcggcacgaccaccgcc
gacgccacggacaagaacgcggacagggccgaggagaaggagcaggccaaggaggagaag
cggaagctgggtgacaccgtcctggccgacgagtccggcaccctcctgcgcctggaagcg
gccgcgctgaccggccaggacgtcaaggaggcggccgcccggctcgaccagcagaacggc
accggatggcatgtgaccctcgacttcgagggggccggaggcgacggctgggcccgcctg
accggccgggccgcctgcgcccccgcgggagacccggcccgacgcgtcgccatcgtcctc
gacgacaagatcatctcctcgccccagatcgatccctcggtccgctgcgagaccggcatc
agcggtggctccacccagatcaccggctccttcggcgccgacgaggccaaggaactcgcc
ctgctcatcaacggcggcgcactgcccgtacccgtggagaacgtcgagcagcgcaccgtc
ggccccaccctcggcgccgaggccatcgaggccagcgcctgggccgccgcggtcggcacc
acactcaccgcgctgttcatcatcgccgtctaccggctcatgggcgtcctcgccaccgtg
gcactgctctgctacggcctgatctcctacgccgccctcgccgccctgggagccaccctc
accctccccggcctcgccggtttcgtcctggccatcggcatggcggtcgacgccaacgtc
ctggtcttcgaacgggcccgggaggagtacgccgcccagcggcggcccagtccccggtcg
gccctgacggcgggcttccggggcgccttcagcgcgatcaccgactccaacgtcaccacc
ctcatcgccgccggcctgctgttcttcctcgcctccggacccgtgcggggcttcggtgtc
accctgggcatcggcgtcctcgcctccatgttcagcgccctggtgatcacccgtgtgctc
gccgaccacgcggccttccggccctcggtccgccgccgtccgcgcctgacgggcatcgcc
aggaccggcgccgtacgcgaccgcctgacgcgcacaccgccgcagctgatgcgccggccc
cggcggtggctggccgcctccgccgtggtcctggccgtcgcggtggccggtatcggcgta
cggggcctggacttcgggatcgagttcaccggcggccgtctcgtggagtacaccaccacc
ccggtcgaccccgaccgggcgcgcgccgctctcgccgacgccggattcccccgggccgtc
gtccagacctccggcgacaacggactcaccgtccgtaccgagcggctgagcgaggcgcag
gcggccgccgtcaccgacaccgtcggcacgctcaccgaccgcgccgacaaggtccgtgac
gaggccatcggccccagcctcggcaaggagctgcgcaacggcgccctgatcgccctcgcc
gtcgccctcggtgcccagcttctctacctcgcggcccgtttccgctggctgttcggcacc
tccgccgtcgccgccctcgcccacgacgtggtgatcctcgtcggcgtcttcgcctggctg
ggcaagcccgtggacggcgtcttcctcgccgccctgctcaccgtcatcggctactcggtc
aacgactccgtcgtcgtcttcgaccgcgtcagggacctcggccgcgtcgaccgcgccgca
cccttcgccgccgtcgccaaccgggccctgctgcagacgctgccccgcaccgtcaacacc
ggcatgggcgccgccttcatcctcaccgccctggcggtgctcggcggcgactccctcacc
gacttcgccctcgccctgctcatcggcctcgccgtgggcacgtactcctcgatgttcacc
gcgacccccctcgccgtcgaactccacaggcgccgctga
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