Streptomyces scabiei: SCAB_66701
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Entry
SCAB_66701 CDS
T01187
Name
(GenBank) putative secreted carbohydrate debranching enzyme
Organism
scb
Streptomyces scabiei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
PUD
Pullul_strch_C
Pullulanase_N2
CBM_48
Alpha-amylase_C
DUF3459
Big_7
Motif
Other DBs
NCBI-ProteinID:
CBG73669
UniProt:
C9ZHE7
LinkDB
All DBs
Position
7378573..7383999
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AA seq
1808 aa
AA seq
DB search
MIPRWPAPFRRRTTHAGRVAAVGAVTVTALTAALVQPLTAGAAAPPAPPSDAKLARTAAR
HDLTREQFYFVLPDRFANGDRANDRGGLTGSRLATGYDPTDKGFYQGGDLKGLTKKLDYI
KGLGTTSIWMAPIFKNQPVQGTGADASAGYHGYWITDFTQVDPHFGTNKDLETLISKAHA
KGMKVFFDVITNHTADVVDYDEKSYDYLSKGAFPYLTKDGKPFDDTDHAGGGKNFPTVDR
DSFPRTPVVPAAQKRTKVPSWLNDPTMYHNRGDSTWAGESAGHGDFVGLDDLWTERPEVV
SGMEKIYEKWVRDFDIDGFRIDTVKHVDMEFWTQWATALDAYAAKKGRDDFFMFGEVYSA
DTSVTSPYVTRGRLDSTLDFPFQDAARSYASQGGSAKKLASVFGDDYKYTTDKANAYEQV
TFLGNHDMGRIGTFLKQDAPKATDAELLAKDRLANELMFLGRGNPVVYYGDEQGFTGAGG
DKDARQTMFASKTADYLDDDLLGTDRTHAEDAYDTSAPLYRRISALAELRRAHPALADGV
QTERYAADGAGVYAVSRTDTRTGTEYVVAFNNADGAEKATFATGSARMTFKGVYGTDGKV
TSGTDKKVTVTVPARSAIVLKAAGPLGKPATKPSVTLDAPAAGATGTVEIGADVGGGQLN
RVVFAAQIGNGRWKTLGSADHAPFKVTQTLDEKVPAGTALRYKAVVIDRTGRTASATAAS
TTGTPPAPETPTASSRDHAIVHYKRADGDYTDWRLYAWGDLAEGEGTTWPDGHDFIGRDA
YGAFAYVKLKPGATSVNYLVIDKDGTKDVSADRTIDVTKTGEIWVEQGKEAVRTEKPTGD
YPEQDRTKAVLHYHRADGDYDGWGLHVWSGAANPTDWARPLEPVRTDTYGAVFEVPLTDG
ATSLGYILHKGDEKDLPTDQALDLKTTGHEAWLLSGQEKYLLPQPAGSAAALDLTTSKAV
WIDRNTVAWNGNDTAASTQLLYSRSGSITAKDGALTSTDERWLRLTKAALTDAQKTKFPH
LKAYTAWTVDPRDRDRVRDALRGQLAASQRAANGAVLAATGVQIAGVLDDLHDGSGAHLG
PTFRKGRPTLAVWAPTAQSVKLELDGKTLPMKRDDTTGVWSVTGGKSWKNKPYRYVVKVW
APSVRKIVTNKVTDPYSVALTADSERSLVVDLADKSLAPSGWSSYTKPKAVPLKDARIQE
LHVRDFSVGDATVPAKDRGTYLAFTDKGSDGSRHLRHLAKAGTSYVHLLPVADIATIPER
KADRATVDCDLASYPADSEKQQECVAKAAAKDGFNWGYDPYHYTVPEGSYATDPDGTRRT
VEFRKMVRALNADGLGVVLDVVYNHTPASGQADRSVLDKVVPGYYHRLLADGSVATSTCC
ANTAPENTMMGKLVVDSLVTWAKEYKVDGFRFDLMGHHPKANILAVRKALDALTLKKDGV
DGKKIILYGEGWNFGEVADDARFVQATQKNMAGTGVATFSDRARDAVRGGGPFDEDPGVQ
GFASGLWTDPNPAADNGTPAEQKARLLHYQDLIKVGLSGNLANYRFTDTDGKEVQGSEVD
YNGTAAGYADAPGDALAYVDAHDNESLFDALAFKLPKSTSPADRARMQVLALATAALSQG
PALSQAGTDLLRSKSLDRNSYDSGDWFNAIHWDCRDGNGFGRGLPLAADNRSKWPYAKPL
LTSVKVGCEQIEGASAAYRDLLRIRTTEDVFSLDTAGQVQSKLSFPLSGRDETPGVITME
LGDLVVVFNATPERRRQTVGDLAGTEYALHRVQAAGADSTVRTSSYEAESGTFVVPGRTV
AVFARTGR
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
gtgataccgagatggccggcgccgttcaggcgccgaaccacccacgctggacgggtcgcg
gcggtcggcgcggtcaccgtgaccgcgctgaccgcggcgctcgtacagccactcaccgcg
ggagccgccgcgccgcccgcgcctccgtccgacgcgaagctggcgaggaccgccgcccgc
cacgacctcacccgcgagcagttctacttcgtcctgccggaccgtttcgccaacggcgac
cgggcgaacgacaggggcggcctgacgggctcgcgcctcgccaccggctacgaccccacc
gacaagggcttctaccagggcggcgacctcaagggcctcaccaagaagctcgactacatc
aagggcctcggcaccacctccatctggatggccccgatcttcaagaaccagcccgtgcag
gggacgggggccgacgcctccgccggctaccacggttactggatcaccgacttcacccag
gtcgacccgcacttcggcaccaacaaggacctggagaccctcatctccaaggcgcacgcc
aagggcatgaaggtcttcttcgacgtcatcaccaaccacaccgccgacgtcgtcgactac
gacgagaagtcctacgactacctctccaagggcgccttcccctacctgaccaaggacggg
aagcccttcgacgacaccgaccacgcgggcggcgggaagaacttccccaccgtcgaccgg
gactccttcccccggacccccgtcgtcccggcggcccagaagaggaccaaggtcccctcc
tggctcaacgacccgacgatgtaccacaaccggggcgactccacctgggccggagagtcc
gccggccacggcgacttcgtcggactggacgacctgtggaccgaacgccccgaggtcgtc
tccggcatggagaagatctacgagaagtgggtccgggacttcgacatcgacggcttccgg
atcgacaccgtgaagcacgtcgacatggagttctggacgcagtgggccaccgcgctcgac
gcgtacgccgcgaagaagggccgcgacgacttcttcatgttcggcgaggtctactccgcc
gacacctccgtgacctccccctacgtcacccggggccgcctcgactccacgctcgacttc
cccttccaggacgcggcacggtcgtacgcctcccagggcggcagcgcgaagaagctggcc
tcggtcttcggggacgactacaagtacacgaccgacaaggccaacgcgtacgagcaggtc
accttcctcggcaaccatgacatgggccgcatcggaaccttcctgaagcaggacgccccc
aaggccaccgacgccgaactgctcgccaaggaccggctcgccaacgagctgatgttcctc
ggacgcggcaacccggtcgtctactacggcgacgagcagggcttcaccggcgcgggcggc
gacaaggacgcccgccagacgatgttcgcctcgaagaccgccgactatctggacgacgac
ctgctcggcacggaccgtacgcacgccgaggacgcgtacgacacgagcgcgccgctctac
cggcggatcagcgcgctcgccgaactccgcagggcgcacccggccctcgccgacggcgtc
cagaccgagcggtacgcggccgacggggcgggcgtctacgccgtctcgcggaccgacacc
cgcaccggcaccgagtacgtcgtcgccttcaacaacgcggacggcgccgagaaggccacc
ttcgccaccgggtcggcccgtatgaccttcaagggcgtctacggcaccgacggcaaggtg
acgagcgggacggacaagaaggtcaccgtcaccgtcccggcccgctcggcgatcgtcctc
aaggccgccgggcctctcgggaagcccgccaccaagccgtccgtcacgctcgacgccccg
gccgccggcgccaccggcacggtcgagatcggcgcggacgtcggcggtgggcagctcaac
cgggtcgtgttcgccgcgcagatcggcaacggccggtggaagacgctgggctccgccgac
cacgcccccttcaaggtcacccagaccctcgacgagaaggtgccggccggaacggctctg
cggtacaaagcggtggtgatcgaccgaaccggacgtacggcgagcgccaccgcggcctcc
accaccggaaccccgcccgcccccgagacccccaccgcctcctcgcgcgaccacgcgatc
gtccactacaagcgcgccgacggcgactacaccgactggcggctgtacgcctggggcgac
ctcgccgagggcgaggggaccacctggcccgacggccacgacttcatcgggcgggacgcg
tacggcgccttcgcgtacgtcaagctcaagcccggcgccaccagcgtcaactacctcgtc
atcgacaaggacggcaccaaggacgtctccgcagaccgcacgatcgacgtgacgaagacg
ggcgagatctgggtcgagcagggcaaggaggccgtccgcacggagaagcccaccggcgac
taccccgagcaggacaggaccaaggccgtcctccactaccaccgcgccgacggcgactac
gacggctggggcctgcacgtctggtcgggagccgcgaaccccacggactgggccaggccc
ctggagcccgtgcggaccgacacctatggcgccgtcttcgaggtgcccctcaccgacggg
gccaccagtctcggttacatcctccacaagggcgacgagaaggacctccccaccgaccag
gcgctggacctcaagacgaccggccatgaggcgtggctgctgagcggccaggagaagtac
ctgctcccgcagcccgccgggtccgccgccgccctcgacctcaccacctccaaggcggtc
tggatcgaccggaacaccgtcgcctggaacggcaacgacaccgccgcctccacccagctg
ctgtactcgcgctccggctcgatcacggcgaaggacggcgctctcaccagcaccgacgag
cggtggctgcgtctgaccaaggcggcgctcaccgacgcccagaagacgaagttcccgcac
ctgaaggcgtacaccgcctggaccgtcgacccgcgtgaccgcgaccgggtccgcgacgcc
ctgcgcggccagttggccgcctcccagcgcgcggcgaacggcgcggtgctcgcggcgacc
ggcgtccagatcgccggcgtgctcgacgacctccacgacggatcgggcgcccacctcggc
ccgacgttccgcaagggccgtccgacactcgccgtctgggcgcccacggcacagtcggtg
aagctcgaactcgacgggaagaccctcccgatgaagagggacgacaccaccggcgtctgg
tccgtcacgggtgggaagtcctggaagaacaagccctaccggtacgtcgtgaaggtgtgg
gcgcccagcgtccggaagatcgtcaccaacaaggtcaccgacccgtactccgtcgccctc
accgccgactccgagcgcagcctcgtcgtcgacctggcggacaagtcgctggcgccgagc
ggctggtcgtcgtacaccaagcccaaggccgtgccgctgaaggacgcgcggatccaggaa
ctgcacgtccgggacttctcggtcggtgacgccaccgtgcccgcgaaggacaggggcacc
tacctcgccttcaccgacaagggcagcgacggctcccggcacctgcggcacctggcgaag
gccggaacgtcgtacgtgcacctgctgcccgtcgccgacatcgccaccatccccgagcgg
aaggccgaccgggcgaccgtcgactgcgacctcgcctcgtaccccgcggactccgagaag
cagcaggagtgcgtggcgaaggccgcggcgaaggacggcttcaactggggttacgacccc
taccactacacggtcccggagggctcgtacgcgaccgacccggacggcacccggcgcacg
gtcgagttccggaagatggtgcgggcgctcaacgccgacggcctcggcgtcgtgctggac
gtggtctacaaccacaccccggccagcgggcaggccgacaggagcgtcctcgacaaggtc
gtccccggctactaccaccggctcctcgccgacggttcggtcgccacctccacctgctgc
gccaacaccgcgcccgagaacaccatgatgggcaaactggtcgtcgactccctcgtcacc
tgggcgaaggagtacaaggtcgacggcttccgcttcgacctgatggggcaccacccgaag
gccaacatcctggccgtccgcaaggccctcgacgccctcaccctcaagaaggacggcgtc
gacgggaagaagatcatcctgtacggggagggctggaacttcggcgaggtggccgacgac
gcgcgcttcgtccaggccacgcagaagaacatggccggcacgggcgtcgccaccttctcc
gaccgggcccgggacgcggtgcgcggcggcggccccttcgacgaggaccccggcgtccag
ggcttcgcgtccggcctctggacggaccccaaccccgcggcggacaacggcaccccggcc
gagcagaaggcccggctgctgcactaccaggacctcatcaaggtcgggctgagcggcaac
ctcgcgaactaccggttcaccgacaccgacggcaaggaggtccagggctccgaggtcgac
tacaacgggaccgccgccgggtacgcggacgccccgggcgacgccctcgcctatgtcgac
gcccacgacaacgagtccctgttcgacgccctggccttcaaactcccgaagtccacgagc
ccggccgaccgcgcccggatgcaggtcctcgccctggcgaccgccgccctctcccagggc
ccggcactctcccaggccggcaccgacctgctgcggtccaagtcccttgaccgcaactcc
tacgacagcggcgactggttcaacgcgatccactgggactgccgggacggcaacggcttc
gggcgcggactgcccctcgccgccgacaaccggtccaagtggccgtatgccaagcccctg
ttgacgtcggtgaaggtcggctgcgagcagatcgagggtgcctcggccgcctaccgggac
ctgctgaggatccgtaccacggaggacgtcttctccctcgacaccgccgggcaggtgcag
tccaagctgtccttcccactgtcggggagggacgagaccccgggcgtgatcaccatggaa
ctcggtgacctggtcgtcgtcttcaacgccacccccgagcggcggaggcagaccgtgggc
gacctggccgggacggagtacgccctgcaccgggtgcaggcggcgggggcggactctacc
gtccggacgtcgtcgtacgaagcggaatcggggaccttcgtcgttccggggcggaccgtg
gcggtcttcgcgcgaacaggccgctga
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integrated database retrieval system
