Streptomyces scabiei: SCAB_68251
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Entry
SCAB_68251 CDS
T01187
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha chain
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
scb
Streptomyces scabiei
Pathway
scb03030
DNA replication
scb03430
Mismatch repair
scb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCAB_68251 (dnaE)
03430 Mismatch repair
SCAB_68251 (dnaE)
03440 Homologous recombination
SCAB_68251 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scb03032
]
SCAB_68251 (dnaE)
03400 DNA repair and recombination proteins [BR:
scb03400
]
SCAB_68251 (dnaE)
Enzymes [BR:
scb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCAB_68251 (dnaE)
DNA replication proteins [BR:
scb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SCAB_68251 (dnaE)
DNA repair and recombination proteins [BR:
scb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SCAB_68251 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
CBG73821
UniProt:
C9YVF0
LinkDB
All DBs
Position
7556875..7560414
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFDACNEMGMTHIAMSDHGNLHGAYDFFHTAKKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANRTGLHNLFKL
SSDAYAEGWLQKWPRMDKETISQWSEGLIASTGCPSGELQTRLRLGQFDEAVKAASEYQD
IFGKDRYFLELMDHGIDIEHRVREDLLRVGKKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSTEEMYAVDSSDAWQEGCANTLLVAEQIDTSGMFEARN
LMPKFDIPEGFTEVTWFREETMRGMHRRFPDGIPDDRMKQVEYEMDTIISMGFPGYFLVV
ADFIMWAKKQGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERISMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLNGITDPSHPRYSEAGEIRSMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPIWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAIKMVKA
NKGIDLEMLALPLDDPKTFELLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSALY
RPGPMGMNSHINYAERKNKRQEITPIHKELEEPLEEVLAVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFTIFQAGAKRNGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMKIKVLPPNVNES
EHNFAAQGDDVILFGLEAVRNVGTNVVESIIRSRKAKGKYASFPDYLDKVEAVACNKRTT
ESLIKAGAFDTMGHTRKGLTAHFDSMIDNVVAVKRKEAEGQFDLFGGMGEEESSEPGFGL
DVEFTTDEWEKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIAQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPASYQLVSTQLVEDAVVFVKGRL
DKREEVPRLVAMEMQVPDLSNAGTNAPVILTIPATRVTPPMVSRLGEILTHHKGDSEVRI
RLQGPTKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctcaaggacatgttcgacgcgtgcaacgagatgggcatgacccacatcgcc
atgtccgaccacggcaacctccacggggcctacgacttcttccacaccgccaagaaggcc
ggcgtcaccccgatcatcggcatcgaggcgtacgtcgcccccgagtcccggcgcaacaag
cgcaagatccagtggggccagccgcaccagaagcgggacgacgtgtccggttcgggcggt
tacacgcacaagacgatctgggcggcgaacaggacgggcctgcacaacctcttcaagctc
tcctcggacgcgtacgccgagggctggctgcagaagtggccccggatggacaaggagacc
atctcccagtggtccgaggggctgatcgcctccaccggctgcccctccggcgagctgcag
acccggctgcgcctcggccagttcgacgaggcggtgaaggcggcctccgagtaccaggac
atcttcggcaaggaccgctacttcctggagctgatggaccacggcatcgacatcgagcac
cgggtccgcgaggacctgctccgggtcggcaagaagctcggcatcccgccgctggtcacc
aacgactcgcactacacgtacgcgcacgaggcgaccgcgcacgacgcgctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttcaagttcgacggcaccggctactac
ctcaagtccaccgaggagatgtacgccgtcgactcctcggacgcctggcaggagggctgc
gccaacaccctgctggtggccgagcagatcgacacctccggcatgttcgaggccaggaac
ctcatgccgaagttcgacatccccgagggtttcaccgaggtcacctggttccgcgaggag
accatgcgcggcatgcaccgccgcttcccggacggcatcccggacgaccgcatgaagcag
gtcgagtacgagatggacaccatcatctcgatgggcttcccgggatacttcctcgtggtc
gccgacttcatcatgtgggccaagaagcagggcatcgcggtcggccccggccgtggctcc
gcggccggctcgatcgtcgcgtacgccatgggcatcaccgacctcgacccgatcccgcac
ggactgatcttcgagcggttcctcaaccccgagcgcatctccatgcccgacgtcgacatc
gacttcgacgagcgccggcgcgtcgaggtgatccggtacgtgaccgagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggcgaagaacgccatcaaggac
tccgcgcgcgtgctcggctacccgtacgcgatgggcgaccggctcaccaaggcgatgccc
gccgacgtcctcggcaagggcatcgacctcaacggcatcaccgacccctcccacccccgc
tacagcgaggcgggcgagatccggtcgatgtacgagaacgaaccggacgtgaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccggcagatgggtgtgcacgcggccggc
gtgatcatgtccagcgagcccatcgtcgaccacgccccgatctgggtgcggcacaccgac
ggcgtcacgatcacccagtgggactacccgcagtgcgagtcgctcggcctgctgaagatg
gacttcctgggcctgcgcaacctcacgatcatggacgacgccatcaagatggtgaaggcc
aacaagggcatcgacctggagatgctcgcgctcccgctggacgatcccaagaccttcgaa
ctgctctgccgcggtgacaccctcggcgtcttccagttcgacggcggcccgatgcgctcc
ctgctccgccagatgcagcccgacaacttcgaggacatctccgccgtctcggccctctac
cggccgggcccgatgggcatgaactcgcacatcaactacgcggagcgcaagaacaagcgc
caggagatcacaccgatccacaaggagctggaggagccgctcgaagaggtcctcgcggtc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgccggg
tactcgctcggcgaggccgacatcctccgccgcgtgatgggcaagaagaagcccgaggag
ctggcgaagaacttcaccatcttccaggccggtgccaagaggaacggctacagcgacgag
gccatccaggccctgtgggacgtcctggtgcccttcgccggctacgccttcaacaaggcc
cactccgccgcgtacggcctcgtctcctactggaccgcgtacctcaaggccaactacccg
gccgagtacatggccgcgctgctcacctcggtcaaggacgacaaggacaagtcggccgtc
tacctcaacgagtgccggcgtatgaagatcaaggtgctcccgccgaacgtcaacgagtcg
gagcacaacttcgccgcccagggcgacgacgtcatcctgttcggcctcgaagccgtgcgc
aacgtcggcaccaacgtggtcgagtcgatcatccgcagccgcaaggccaaggggaagtac
gcctccttccccgactacctcgacaaggtcgaggccgtcgcctgcaacaagcgcaccacg
gagtcgctgatcaaggcgggcgcgttcgacacgatggggcacacccgcaagggcctcacc
gcgcacttcgactcgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggc
cagttcgacctcttcggcggcatgggcgaggaggagagcagcgagccgggcttcgggctc
gacgtcgagttcaccaccgacgagtgggagaagacctatctcctcgcccaggagcgggag
atgctcggcctctacgtctccgaccaccccctcttcggactggagcacgtgctctccgac
aaggccgacgcgggcatcgcccagctcaccggcggcgagcacgcggacggcgcggtcgtc
accatcggcggcatcatctccggcctgcagcgcaagatgaccaagcagggcaacgcctgg
gcgatcgcgacggtggaggacctcgccggttccatcgagtgcatgttcttccccgcgtcc
taccagctcgtgtcgacccaactcgtcgaggacgcggtcgtgttcgtcaagggccgcctc
gacaagcgcgaggaggtcccgcggctggtcgccatggagatgcaggtccccgacctgtcg
aacgcgggcaccaacgcgccggtgatcctcaccatcccggccacccgggtcaccccgccc
atggtcagccggctcggtgagatcctcacccaccacaagggcgacagcgaggtccggatc
aggctccagggccccaccaagacgaccgtgctgcgcctggaccggcaccgggtgaagccg
gatccggccctgttcggcgatctgaaggtgctgctcggcccgtcctgcctggccggctga
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integrated database retrieval system
