Streptomyces scabiei: SCAB_70521
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Entry
SCAB_70521 CDS
T01187
Name
(GenBank) putative secreted bifunctional pectate lyase/pectinesterase
KO
K01051
pectinesterase [EC:
3.1.1.11
]
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
scb
Streptomyces scabiei
Pathway
scb00040
Pentose and glucuronate interconversions
scb01100
Metabolic pathways
scb02020
Two-component system
scb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SCAB_70521
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SCAB_70521
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCAB_70521
Enzymes [BR:
scb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
SCAB_70521
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SCAB_70521
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Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
CBG74045
UniProt:
C9YYE3
LinkDB
All DBs
Position
7809540..7811549
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AA seq
669 aa
AA seq
DB search
MGAAMTHLRSKRLPHRGGALAAVTALLASSVAGALTPAEAATPAGTASAQAAPRWSDRPH
GFASLDGGTTGGAGGKVVTVTDQAALARYASAEEPYVIRVAGSIDVAPFGSDIDVASDKT
IIGVGDTGEIVHGELHLNPGTSNVIIRNLTIRDSYVEGDWDGKTTDFDAIQMDSADHIWI
DHNRFEHMGDGLLDIRKDSRYVTVSHNQFRNHNKALGIGWTTNVRTEITIDHNWFTGTKQ
RNPSADNCAYAHLYNNYLSAQVADGDPVWTYGNWARGRTKMVIENSYYDGVQHPYQADAT
AELVQRGSILKNAGGRQDAWGDAFRPRDFYRYRLDPAAAVPALVTRFSGPQKTLGTDTVL
NVPGDYASVQAAVDAVPAGNDGTVTIRIAPGTYRAKVLIPADRPNLVLRGTGRDRSDTVL
VFDTPAEYGGSNGSATVRILASDVTARNLTFSNDFDEAAHELKGEQALAMKTTGDRIVFE
NTAFLGNQDTLMTDSPKLDVVSRVYIRDSYIEGDVDFLYGRATTVVERSLIKALNRGSDS
NNGYITAASTWKDNPYGFLITRSKVVSDAPSGTYHLGRPWHPGGEPDAVAQVLFRETELP
AAVKSSPWTDMSGFSWKDARFTEYRTYGPGSGVTADRPQLDRADASTHTVTQYLAGKDGW
APHRGRTGH
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
ttgggagccgcaatgacgcacctccgtagcaagcgcttaccgcaccgtggcggagccctg
gccgccgtcaccgccctgctggcctcgtccgtggccggcgcgctcaccccggccgaggcc
gcgaccccggccgggaccgcctccgcccaggcggcgccccgctggagcgaccggccgcac
ggcttcgcctccctcgacggcggcaccaccgggggcgccggcggcaaggtcgtgaccgtc
accgaccaggccgcgctggcgcggtacgcgtccgccgaggagccctacgtcatccgggtg
gccgggtccatcgacgtggcgcccttcggctcggacatcgacgtggcctcggacaagacg
atcatcggggtcggcgacaccggtgagatcgtccacggcgaactgcacctgaaccccggc
accagcaacgtcatcatccgcaacctgacgatccgggactcctacgtcgagggcgactgg
gacggcaagaccaccgacttcgacgcgatccagatggactccgccgaccatatctggatc
gaccacaaccgtttcgagcacatgggcgacgggctgctcgacatccgcaaggacagccgg
tacgtcaccgtctcccacaaccagttcaggaaccacaacaaggccctcggcatcggctgg
acgacgaacgtccggaccgagatcaccatcgaccacaactggttcaccggcaccaaacag
cgcaacccctccgccgacaactgcgcctacgcgcacctctacaacaactacctctcggcg
caggtggccgacggcgacccggtgtggacgtacgggaactgggcgcgcggccgcacgaag
atggtcatcgagaacagctactacgacggggtccagcacccctaccaggccgacgccacc
gccgagctggtgcaacgtgggtcgatcctgaagaacgccggcgggcggcaggacgcctgg
ggcgacgccttccggccgagggacttctaccgctaccggctcgacccggccgccgccgtg
cccgcgctggtcacccggttctccggcccgcagaagacgctcggcacggacaccgtgctg
aacgtccccggcgactacgcgagcgtgcaggccgccgtggacgcggtgcccgccggcaac
gacggcacggtcacgatccgcatcgcgcccggcacctaccgcgccaaggtcctgatcccg
gcggacaggccgaacctggtgctgcgcggcaccggacgggaccgctcggacaccgtcctc
gtcttcgacacgcccgccgagtacggcggctccaacggcagcgccaccgtgcggatcctc
gccagtgacgtgaccgcccgcaacctcaccttcagcaacgacttcgacgaggccgcgcac
gagctgaagggcgagcaggccctcgcgatgaagaccaccggcgaccggatcgtcttcgag
aacacggccttcctgggcaaccaggacacgctgatgaccgacagccccaagctcgacgtc
gtcagccgcgtctacatccgtgactcgtacatcgagggcgatgtcgacttcctctacggc
cgggccaccaccgtcgtcgagcgctccctgatcaaggcgctcaacaggggctcggacagc
aacaacggctacatcacggccgcctcgacctggaaggacaacccttacgggttcctgatc
acccggtcgaaggtcgtcagcgacgcgccctccgggacgtaccacctcggcaggccctgg
cacccgggcggcgagccggacgccgtcgcccaggtgctgttccgggagaccgaactgccc
gccgcggtcaagtcctcgccgtggacggacatgagcggcttctcctggaaggacgcgcgg
ttcacggagtaccggacgtacgggccgggatcgggtgtcaccgccgaccggccgcagctc
gaccgcgccgacgcatcgactcacacggtcacccagtacctcgcggggaaggacggctgg
gcaccgcaccgcggtcgcaccggccactga
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