Streptomyces scabiei: SCAB_71881
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Entry
SCAB_71881 CDS
T01187
Name
(GenBank) putative pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
scb
Streptomyces scabiei
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scb03009
]
SCAB_71881
Enzymes [BR:
scb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
SCAB_71881
Ribosome biogenesis [BR:
scb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SCAB_71881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CBG74179
UniProt:
C9Z1B5
LinkDB
All DBs
Position
7952627..7953568
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AA seq
313 aa
AA seq
DB search
MGPGASPEGPKSGRGASARGGAKGGPKQSPGSGRGRWAPATSREYDARAEERNRERYAGK
KDVKLPKTFPGAEQEGERLQKILARAGYGSRRSCEELIEQARVEVNGEIVLEQGKRVDPE
KDEVKVDGLTVATQSYQFFSLNKPAGVVSTMEDNEGRQCLGDYVTNRETRLFHVGRLDTE
TEGVILLTNHGELAHRLTHPKYGVKKVYLAHIVGPIPRDLGKQLKDGIQLEDGYARADHF
RVVQQTGKNYLVEVTLHEGRKHIVRRMLAEAGFPVDKLVRVAFGPITLGDQKSGWLRRLS
NTEVGMLMQEVDL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgggccccggcgcctccccggagggaccgaagtcgggccgcggcgcgtccgcgcgcggt
ggcgccaagggcggccccaagcagtccccgggcagcgggcggggccggtgggccccggcg
acctcccgcgagtacgacgcgcgggcggaggagcgcaaccgggagcggtacgcgggcaag
aaggacgtcaagctgcccaagaccttcccgggcgccgagcaggagggcgagcggctgcag
aagatcctcgcgcgcgcgggctacggctcccggcgctcctgcgaggaactgatcgagcag
gcgcgcgtcgaggtcaacggcgagatcgtgctggagcagggcaagcgggtcgacccggag
aaggacgaggtcaaggtcgacgggctgaccgtcgcgacccagtcgtaccagttcttctcg
ctgaacaagccggccggtgtcgtctccacgatggaggacaacgagggccgtcagtgcctc
ggcgactacgtcaccaaccgtgagacgcggctcttccacgtggggcggctcgacaccgag
accgagggtgtcatcctgctcaccaaccacggcgagctggcgcaccggctgacgcacccc
aagtacggcgtgaagaaggtctacctcgcgcacatcgtgggcccgatcccgcgtgacctg
ggcaagcagctcaaggacggcatccagctggaggacgggtacgcgcgcgcggaccacttc
cgggtcgtgcagcagaccggcaagaactacctcgtcgaggtcaccctgcacgaggggcgc
aagcacatcgtgcgccggatgctggcggaggccgggttcccggtcgacaagctggtgcgc
gtggccttcggaccgatcaccctcggcgaccagaagtcgggctggctgcgccggctgtcc
aacaccgaggtcgggatgctgatgcaggaggtcgacctctag
DBGET
integrated database retrieval system
