Streptomyces scabiei: SCAB_74891
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Entry
SCAB_74891 CDS
T01187
Symbol
ruvB
Name
(GenBank) holliday junction DNA helicase
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
scb
Streptomyces scabiei
Pathway
scb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SCAB_74891 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scb03400
]
SCAB_74891 (ruvB)
Enzymes [BR:
scb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCAB_74891 (ruvB)
DNA repair and recombination proteins [BR:
scb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SCAB_74891 (ruvB)
RecFOR pathway proteins
SCAB_74891 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
nSTAND3
DUF815
Sigma54_activat
AAA_14
AAA_3
RNA_helicase
Sigma54_activ_2
TsaE
AAA_28
AAA_18
Zeta_toxin
AAA_25
AAA_19
Motif
Other DBs
NCBI-ProteinID:
CBG74470
UniProt:
C9Z643
LinkDB
All DBs
Position
8280946..8282016
Genome browser
AA seq
356 aa
AA seq
DB search
MNWDDTTDDTAAERLVGSVADREDQAVEAALRPKDLGEFIGQEKVREQLDLVLRAARARG
ATADHVLLSGAPGLGKTTLSMIIAAEMGAPIRITSGPAIQHAGDLAAILSSLQEGEVLFL
DEIHRMSRPAEEMLYMAMEDFRVDVIVGKGPGATAIPLELPPFTLVGATTRAGLLPPPLR
DRFGFTAHMEFYEPAELERVIHRSANLLDVEIDTDGAAEIAGRSRGTPRIANRLLRRVRD
YAQVKADGFITRDIAGAALAVYEVDARGLDRLDRGVLEALLKLFGGGPVGLSTLAVAVGE
ERETVEEVAEPFLVREGLLARTPRGRVATPAAWAHLGLTPPRGTTGGNGQQDLFGA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaactgggacgacacgaccgacgacaccgccgccgagaggctggtgggctccgtcgcc
gaccgtgaggaccaggccgtcgaggccgccctgcgcccgaaggacctgggggagttcatc
ggccaggagaaggtccgtgaacagctcgacctggtcctgcgggccgcacgcgcgcgaggt
gccaccgccgaccacgtgctgctctccggcgcccccggcctcggcaagaccaccctctcg
atgatcatcgcggccgagatgggcgcccccatccggatcacctccggccccgccatccag
cacgccggcgacctcgccgcgatcctctcctccctccaggagggcgaggtcctcttcctc
gacgagatccaccgcatgtcccggcccgccgaggagatgctctacatggcgatggaggac
ttccgtgtcgacgtgatcgtcggcaagggccccggcgccaccgccatccccctcgaactg
ccgcccttcaccctggtcggcgccaccacacgcgcgggactgttgcccccgccgctgcgc
gaccgcttcggcttcaccgcgcacatggagttctacgagcccgccgagctggagcgggtg
atccatcgctcggcgaacctcctcgacgtcgagatcgacacggacggcgccgccgagatc
gcgggccgctcccgcggcaccccccgtatcgccaaccgcctgctgcgccgcgtacgggac
tacgcgcaggtcaaggccgacggcttcatcacccgcgacatcgccggggccgccctcgcc
gtctacgaggtggacgcccggggcctcgaccgcctggaccggggcgtcctcgaagccctg
ctcaagctcttcggcggcggaccggtcggtctctccacgctcgcggtcgcggtgggggag
gagcgtgagaccgtggaggaggtggccgagcccttcctcgtccgggagggactgctcgcc
cggaccccccgcggccgggtcgcgacccccgccgcctgggcccacctcggactcaccccg
ccacgcggtacgaccgggggaaacggacaacaggacctgttcggggcgtga
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