Streptomyces scabiei: SCAB_80191
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Entry
SCAB_80191 CDS
T01187
Name
(GenBank) putative DNA polymerase III, epsilon chain (EC 2.7.7.7).
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
scb
Streptomyces scabiei
Pathway
scb03030
DNA replication
scb03430
Mismatch repair
scb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCAB_80191
03430 Mismatch repair
SCAB_80191
03440 Homologous recombination
SCAB_80191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scb03032
]
SCAB_80191
03400 DNA repair and recombination proteins [BR:
scb03400
]
SCAB_80191
Enzymes [BR:
scb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCAB_80191
DNA replication proteins [BR:
scb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SCAB_80191
DNA repair and recombination proteins [BR:
scb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SCAB_80191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CBG74981
UniProt:
C9ZG17
LinkDB
All DBs
Position
8892916..8894757
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AA seq
613 aa
AA seq
DB search
MVLLSSPKWPTLPDYLHDWALVDVETSGLRPGRDRVLSLSILTLDAQGNQTGEFSTLLNP
DCDPGPVHVHGLTADRLAGAPAFEEIAPQVGALLSSRVLVAHNAQFDYDFLAHEFAQVRS
WAPVSRRLCTLALNRLVGPATPDLKLGTLAAHYGVRQEKAHDAQDDVRVLSGILRGSLSA
AEQLGLALPVLGCPPRQDYRPYVPKTPCAYRNPGRMAPGGPLVQGMKVAITGDTRVSREE
LVARSVAAGLNMMTSVSGQTSVVVTNAPGTGSAKLKRAADEGVPLVDEPTYLRLLKILQP
GQAKSVARQRSAAQTSAGAPTAPPAPTPAVPVQRTAAPTESAITADQPLTGRRVLVLGGT
HDEAAKARARAVALGASVAVNLSASVSDVVVLPGGEADRRMSRIAALGLRVYDADWLFAP
TTTAIPSPARDAAGNRPDTAAVLVRGAVLDLPDTGTAWTVSAAWRQQTSCDVDVVAFAVD
AGEQVAGDEDFVFYGAPEHPDGTVRLATDGPTEQAVTADLERLALEVHRVVIAAAIDGAA
TFADVGAVEITAARGIGAAPTARATLDAATTERTMILAELYRRGEGWRLRAIGQGYDHGL
ADLARGYGVDVAE
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgttgtcgagtccgaagtggcccaccctgcccgactacctccatgactgggcg
ctggtggacgtggagacttccgggctgagaccgggccgggaccgtgtcctctcgctctcg
atcctcaccctggacgcacagggcaatcagacaggggagttctcgacccttctcaaccca
gactgcgatccgggcccggtgcacgtccacggcctcactgcggaccgtctcgccggcgcg
cccgcttttgaggagatagccccgcaagtgggggcacttctcagcagccgcgtcctggtt
gcccacaacgcgcagttcgactatgacttcctggctcacgagttcgcccaggtccgctcc
tgggcgccggtgagcaggcggttgtgcacgctggccctcaaccgtctggtcgggcccgcg
acgcccgatctgaagctgggcacgctcgccgcgcactacggtgtgcgtcaggagaaggcc
cacgacgcgcaggacgatgtacgggtgctctcgggcatcctgcgcggttccttgagcgct
gccgagcaactgggcctggccttgcccgtcctggggtgtccgcctcgccaggactaccgg
ccgtacgtgccgaagacaccctgtgcgtaccgcaatccgggccgaatggcacctggcggg
ccgctggtgcagggcatgaaggtcgccatcaccggcgacaccagggtctcgcgtgaggaa
ctcgtcgcccgctcggtggcggccgggctcaacatgatgacctcggtcagcggccagacc
agcgtcgtcgtgaccaacgcccccggcactggatctgccaagctgaagcgagccgcggac
gagggggtccccctcgtggacgagccgacttatctgcggctgctgaagatcctgcagccc
ggccaggccaaaagcgttgcccggcagcgctccgctgcgcagacgtccgcgggcgcgccc
accgcaccgcccgcgccgacgcctgctgtcccggtccagcggactgccgcaccgaccgaa
tccgcgatcactgcggatcagccgctcacgggccgcagggtcctggtcctgggcggcacg
cacgatgaggccgcgaaggcacgcgcgcgtgctgtcgccctgggagcttccgtggcggtc
aacctctccgccagcgtgtccgacgtcgtcgtgctgcccggcggggaggcggaccggcgc
atgagtcgtatcgccgctctcggcctgcgcgtgtacgacgccgactggctgttcgcgccc
accaccacggcgattccctcgcccgcccgggacgcggcaggaaaccggccggacacggcg
gcggtcctcgtgcgaggcgccgtcctcgatctgcctgacaccggcacggcctggacggtg
tccgccgcgtggcgtcagcagacctcgtgtgacgtggatgtcgtcgccttcgcggtcgac
gcgggcgaacaggtggctggagacgaggacttcgtcttctacggcgcgcccgagcatccc
gatggcaccgtacggctcgccacagacggtccgacggagcaggccgtcaccgccgacctg
gagcggctggccttggaggtccaccgggttgttatcgccgccgcgatcgacggcgccgcg
accttcgccgatgtcggggccgtagagatcaccgccgcccgcgggatcggcgcggccccg
accgcgcgggccaccctggatgccgccaccacggagcgcaccatgatcctcgccgagctt
taccggcgaggagagggctggcggctgcgtgccatcggacaggggtacgaccacggcctc
gcggacctcgctcgcggctacggtgtcgatgtcgcggaatag
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