Streptomyces scabiei: SCAB_84521
Help
Entry
SCAB_84521 CDS
T01187
Name
(GenBank) putative siderophore biosynthesis decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
scb
Streptomyces scabiei
Pathway
scb00300
Lysine biosynthesis
scb00470
D-Amino acid metabolism
scb01100
Metabolic pathways
scb01110
Biosynthesis of secondary metabolites
scb01120
Microbial metabolism in diverse environments
scb01230
Biosynthesis of amino acids
Module
scb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SCAB_84521
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SCAB_84521
Enzymes [BR:
scb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SCAB_84521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CBG75398
UniProt:
C9Z012
LinkDB
All DBs
Position
9438978..9440258
Genome browser
AA seq
426 aa
AA seq
DB search
MNQMHPVNQMHPVNQMHPVNQKHSMNEEPSMTLPTPAVRDRALSLPSTRLPAYVYDMTAL
RDHAARVRAALPERVELYYAAKANPEPEILAALGPYVDGYEVASGGELAHVAQAVPGRPL
AFGGPGKTPDEIRDALERGVARFHVESEHELRMLGELARRAAPARPVGVLLRFNLAVADG
SLAGSALAMGGRPAPFGLDPGRAADVLRPLTDGTHPHLEPLGVHAHLASGLDAPSLLSVA
RSVVDWATALDMPVREVNVGGGMAVDYTRPESRFAWQEYGAGLARLTDAHPDLTLRIEPG
RALTAYCGWYATEVLDVKRSHGEEFAVVRGGTHHLRTPATKGHDQPCSVLAVERWPHPWP
RPSAEGERVTLAGQLCTPKDVLARHVRAPGLRAGDRVAFALAGAYAWNISHHDFLMHPHP
GFHIVD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccagatgcacccggtgaaccagatgcacccggtgaaccagatgcacccggtgaac
cagaagcattcgatgaacgaggagccgtcgatgaccctgcccacccccgccgtacgcgac
cgcgccctctccctgccgtccacccggcttcccgcctacgtgtacgacatgacggccctg
cgcgaccacgccgcacgggtgcgggcagccctcccggaacgggtcgagctgtactacgcg
gccaaggccaaccccgagccggagatcctggccgcgctcggcccgtacgtcgacggctac
gaggtggcctccggcggtgaactcgcccatgtggcgcaggccgtccccggcagaccgctg
gccttcggcgggcccggcaagacccccgacgagatccgggacgccctggagcggggcgtc
gcgcgcttccacgtcgagagcgagcacgagctgcggatgctcggcgaactggcccggcgt
gcggcaccggcccggcccgtcggggtgctcctgcgcttcaacctcgcggtggccgacggc
tcactggcgggcagtgcgctcgcgatgggaggacgtcccgccccgttcggcctggacccc
ggccgggccgcggacgtgctgcgccccctcaccgacggcacccatccgcacctggaaccg
ctcggcgtccacgcccacctggcgagcgggctcgacgccccctccctgctctccgtcgcc
cgttcggtcgtggactgggcgacggccctggacatgccggtgcgcgaggtgaacgtcggc
ggcgggatggccgtggactacacccgccccgagagccgcttcgcctggcaggagtacggc
gcgggcctcgcccggctcaccgacgcgcacccggacctgaccctgcgcatcgagccgggc
cgggcgctgaccgcgtactgcggctggtacgccaccgaggtgctggacgtgaagcgcagc
cacggcgaggagttcgccgtggtccggggcggcacccaccacttgcgcacccccgccacc
aaggggcacgaccagccgtgctcggtcctggcggtggagcggtggccgcacccgtggccg
cgtccgtcggccgagggggagcgcgtcaccctcgccgggcagttgtgcacaccgaaggac
gtcctcgcgcgtcacgtgcgcgcgccggggctgcgggcgggtgacagagtcgccttcgcg
ctcgcgggcgcctacgcctggaacatctcgcaccacgacttcctcatgcatccgcacccc
gggttccacatcgtcgactga
DBGET
integrated database retrieval system
