Streptomyces scabiei: SCAB_85741
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Entry
SCAB_85741 CDS
T01187
Name
(GenBank) putative LysR-family transcriptional regulator
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
scb
Streptomyces scabiei
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scb03000
]
SCAB_85741
03036 Chromosome and associated proteins [BR:
scb03036
]
SCAB_85741
Transcription factors [BR:
scb03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SCAB_85741
Chromosome and associated proteins [BR:
scb03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
SCAB_85741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_AsnC-type
HTH_24
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
CBG75519
UniProt:
C9Z1N6
LinkDB
All DBs
Position
complement(9590623..9591531)
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AA seq
302 aa
AA seq
DB search
MMSQLPVDLVRTLLTVVDEGTFDAAAAALHVTPSAVSQRVKALEQRVGRVLLVRAKPVRT
TESGEVIVRFARQLARLEHDAHTALGTTGAGETTRVSIAVNADSLATWFLPALTRVPEEL
RPCYELLREDEQHTARLLREGLVTAAVTSAPDAVAGCSVRPLGRMRYLPCASPGFAERWL
GAGSEVPLGDVITDAPVVFFDRRDDFQNVFVRRLTHGRPAGGRRHYVPTSEGFADAVAAG
MGWGMVPAAQAEPLLAAGRLVDLAPERPVDTPLFWQQWKLDSPTLTAVADAVAAEAAEAL
DP
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
gtgatgtcccagcttccggtcgacctggtgcgcaccctcctcacggtggtggacgagggt
acgttcgacgcggcggccgccgccctgcacgtgacgccgtcggcggtcagccagcgggtc
aaggccctggagcagcgggtcggccgggtcctgctggtccgcgccaagccggtgcggacg
accgagtccggtgaggtgatcgtccggttcgcgcgccagctggcccgcctcgaacacgac
gcgcacaccgcgctcggcacgaccggcgccggcgagaccacacgggtgtccatcgcggtg
aacgccgactcgctggccacctggttcctgcccgccctcacccgcgtgccggaggaactg
cgcccctgctacgaactgctgcgcgaggacgagcagcacacggcccggctgctgcgcgag
ggcctggtgacggccgcggtcacctcggctccggacgccgtggccgggtgctcggtccgg
ccgctcggccggatgcggtacctgccgtgcgcctcgccgggcttcgccgagcgatggctc
ggcgccggatccgaggtgccgctcggggacgtgatcacggacgcgccggtcgtgttcttc
gaccggcgcgacgacttccagaacgtcttcgtccgccggctgacgcacggccgcccggcc
ggggggcgccggcactacgtgccgacgtccgagggtttcgccgacgccgtggccgccggg
atgggctggggcatggtgcccgccgcgcaggccgagccgttgctcgccgccggacggctc
gtcgacctggcgccggagcggcccgtggacaccccgctgttctggcagcagtggaagctc
gactcgcccacgctgacggccgtcgcggacgcggtcgccgcggaggccgccgaggcgctc
gacccgtga
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