Streptomyces scabiei: SCAB_85971
Help
Entry
SCAB_85971 CDS
T01187
Name
(GenBank) putative sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
scb
Streptomyces scabiei
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scb03021
]
SCAB_85971
Transcription machinery [BR:
scb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCAB_85971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
HTH_3
HTH_Crp_2
DUF7343
Sigma70_ECF
HTH_1
MarR
HTH_10
PhyR_sigma-like
HTH_37
Trp_repressor
MarR_2
GerE
HTH_24
HTH_11
YdaS_toxin
OrfB_IS605
Motif
Other DBs
NCBI-ProteinID:
CBG75540
UniProt:
C9Z1Q7
LinkDB
All DBs
Position
complement(9609723..9610550)
Genome browser
AA seq
275 aa
AA seq
DB search
MTEAGDLPLIEDPSQVRPKDARAMSRQFFDRLAVLDEGTHTYQYVRNTLIEMNLSLVRYA
ASRFRGREDSLEDIVQVGTIGLIKAIDRFELSREVEFTTFAVPYIVGEIKRFFRDTSWAV
HVPRRLQEARVELARATDELQSRLGRMPTTRELSELMSLSEEEVIEARKASNGYNTSSLD
AALTSDGGDDGDAVLGDLIGEEDHALQLVEDFHSLAPLIAQLDDRERRIIHLRFVEEWTQ
SQIAEELGVSQMHVSRLISRIIKRLRTGLLEPGVA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggcgggggacctcccgctgatcgaggacccgtcacaggtcaggcccaaggac
gcgcgagcgatgtctcggcagttcttcgaccggctggctgtgctggacgagggcacgcac
acctaccagtacgtgcgcaacacgctgatcgagatgaacctgtcgctcgtgcggtacgcg
gcctcgcgcttccgggggcgtgaggactccctggaggacatcgtccaggtcgggacgatc
gggctgatcaaggccatcgaccggttcgagctgtcccgggaggtggagttcaccacgttc
gccgtgccgtacatcgtcggcgagatcaagcggttcttccgcgacacgagctgggcggtg
cacgtgccgcgacggctgcaggaggcgcgggtggagctggcccgcgcgacggacgagctg
cagtcccggctgggccggatgccgacgacgcgtgagctgtccgagctgatgtcgctgtcg
gaggaggaggtcatcgaggcgcgcaaggcgtccaacggctacaacacctcctccctcgac
gcggccctcacctccgacggcggcgacgacggcgacgccgtgctcggcgacctcatcggc
gaggaggaccacgcgctgcagctcgtcgaggacttccactccctggcgccgctgatcgcc
cagctcgacgaccgggagcggcgcatcatccatctgcggttcgtcgaggagtggacccag
tcgcagatcgccgaggagctgggcgtgtcgcagatgcatgtgtcccggctgatcagccgg
atcatcaagcggctgcgcacggggctgctggaacccggtgtcgcctga
DBGET
integrated database retrieval system
