Streptomyces scabiei: SCAB_86111
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Entry
SCAB_86111 CDS
T01187
Name
(GenBank) putative lysine/ornithine decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
scb
Streptomyces scabiei
Pathway
scb00300
Lysine biosynthesis
scb00470
D-Amino acid metabolism
scb01100
Metabolic pathways
scb01110
Biosynthesis of secondary metabolites
scb01120
Microbial metabolism in diverse environments
scb01230
Biosynthesis of amino acids
Module
scb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SCAB_86111
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SCAB_86111
Enzymes [BR:
scb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SCAB_86111
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CBG75553
UniProt:
C9Z332
LinkDB
All DBs
Position
complement(9622400..9623869)
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AA seq
489 aa
AA seq
DB search
MSDDDPLYLEPRLEPRTAALLDSAPLLHTLVDALGSPLNVLLPDQIADNVRRFRAVLDRH
RLAGRICFAHKANRAGSLVRRLTTTEAALDAASLGELRHALGSGFTGSRIMATGPKDPRF
LWLAARSGACLNADGPAELEGAASLVRAHGLPRVRVLLRLSGFEAPGTRTLSRRSRFGTP
VKSLHLLLDVLDRHREELEPIGVGYHLDTTSVDEKAVALEGCLRAMEELRVRGFRPRVID
VGGGFGVNYLAHAAQWERYTTELTAAVMGVRPPLTWGGHGYGLRVENGTLKGALSLYPAH
RPTAGAAYLDELLSRPAPTLGRPLGTLLLESLYDLCVEPGRALVDQCGLTLGKVLEVRPT
DGGEPMVRLAMNAGDVGLEDHGVLMDPVVLPRDPAPRGRAGPVGVHLLGNLCLEADLLTR
RTVFLPRLPRPGDVLAFVNTAGYCMDFAATHAQQQPLARKVAVHEENGRLRWCLDEEYWP
LDRTGDPQG
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgacgacccgttgtacctggaaccccggctggagccgcgcaccgcggcgctg
ctggactcggcacccctgctgcacaccctggtggacgccctcggctccccgctgaacgtc
ctcctgccggaccagatcgccgacaacgtccggcgcttccgtgcggttctcgaccgccat
cggctcgccggcaggatctgcttcgcccacaaggcgaaccgtgcgggctcgctcgtgcgc
cggctcaccacgacggaggcggccctggacgccgcgtcgctcggcgagctgcggcacgcg
ctcggttcggggttcacggggtcccggatcatggcgaccggccccaaggacccgaggttc
ctgtggctcgccgcgcgcagcggggcgtgtctgaacgccgacggtcccgccgagctggag
ggggcggcgagtctcgtgcgcgcgcacggactgccgcgtgtccgtgtcctgttgcggctc
tccggcttcgaggcgccgggaaccaggacgctctcgcgcaggagccgcttcggtacgccc
gtgaagtccctgcacctgctgctggacgtcctcgaccggcaccgggaggagctggagccg
atcggcgtcggctaccacctcgacaccacgagcgtcgacgagaaggcagtggccctcgaa
ggctgcctccgggccatggaggagctgcgcgtccgcgggttccggccgcgcgtcatcgac
gtcggcggcggcttcggcgtgaactacctggcgcacgcggcccagtgggagcggtacacc
accgagctgacggccgccgtcatgggcgtccggccgccgctgacctggggcggccacgga
tacggtctgcgggtcgagaacggcaccctcaagggcgccctgagcctgtacccggcccat
cggcccacggccggcgccgcgtacctcgacgagctgctctcccgccctgcgccgaccctg
ggccgtcccctgggcaccctcctgctggagagcctctacgacctctgtgtcgagcccggc
cgggccctggtggaccagtgcgggctcactctcggcaaggtcctggaggtgcggcccacg
gacggcggggagcccatggtgcgtctcgcgatgaacgcgggtgacgtgggtctggaggac
cacggtgtgctgatggaccccgtggtcctgccgcgcgaccccgccccgcgcggccgggcc
ggcccggtgggagtccatctcctgggcaacctctgcctggaggcggacctcctgacccgt
cgcacggtgttcctgccccggctgccgcgccccggcgatgtcctcgccttcgtcaacacg
gcgggatactgcatggacttcgccgccacccacgcccaacagcagcccctggcacgcaag
gtggccgtccacgaggagaacggccggctgcggtggtgtctggacgaggagtactggccg
ctcgaccgtacgggggacccgcagggatga
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