Streptomyces scabiei: SCAB_89421
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Entry
SCAB_89421 CDS
T01187
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
scb
Streptomyces scabiei
Pathway
scb03030
DNA replication
scb03430
Mismatch repair
scb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCAB_89421
03430 Mismatch repair
SCAB_89421
03440 Homologous recombination
SCAB_89421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scb03032
]
SCAB_89421
03400 DNA repair and recombination proteins [BR:
scb03400
]
SCAB_89421
Enzymes [BR:
scb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCAB_89421
DNA replication proteins [BR:
scb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SCAB_89421
DNA repair and recombination proteins [BR:
scb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SCAB_89421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Optomotor-blind
Motif
Other DBs
NCBI-ProteinID:
CBG75877
UniProt:
C9Z7X4
LinkDB
All DBs
Position
complement(9974071..9974718)
Genome browser
AA seq
215 aa
AA seq
DB search
MRFPFRGPATDSALEQEWRSAEYCVIDLETTGLDLRRDEIISVGAVPVREGRIDLGDSFY
SLVRPRCAVSVASIKVHGLRPGDLDSAPDPATVGQALSPRLSGRVVVAHAAWIERAFLSR
TQSTVGWSQVRAVVDTAALARATGCWAGHDSGREPPLELLARRLGLPVCTPHHALGDALT
TATVFLALAARAERTRHPSALSVRDLCALSNAHAH
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgagatttccgttcagggggcccgcgacggactccgctctggagcaggagtggcgctcg
gccgagtactgcgtgatcgacctcgagacgacggggctcgatctgcggcgcgacgagatc
atctccgtcggcgcggtgcccgtccgggagggccgcatcgacctcggtgacagcttctac
tccctcgtacgtccacgctgtgccgtctcggtggcctccatcaaggtccacgggctgcga
ccgggcgatctcgacagcgcgcccgatccggccacggtggggcaggcgctctccccacgc
ctgtccggccgcgtggtcgtggcccacgccgcatggatcgagcgggcgttcctcagccgt
acgcagagcacggtgggatggtcacaggtccgcgcggtcgtcgacacagcggcgctcgcc
cgtgccaccggatgctgggccggacacgattccggccgcgagccgccgctggaactgctg
gcccgtcggctggggctccccgtgtgcacccctcatcacgccctgggcgacgccctcacc
accgcgaccgtgttcctggctctggcggcccgggcggagcgcacccgccacccctccgcc
ctctcggtccgcgacctgtgtgcgctgtcgaacgcgcacgcccactga
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