Parasphaerochaeta coccoides: Spico_0014
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Entry
Spico_0014 CDS
T01469
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc02010
ABC transporters
scc02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spico_0014
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Spico_0014
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scc02000
]
Spico_0014
Transporters [BR:
scc02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Spico_0014
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
NAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AEC01256
UniProt:
F4GI97
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All DBs
Position
13724..14755
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AA seq
343 aa
AA seq
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MKKVLKKVALVCLVGMIAMGSLMAQGRGEQAASGPKNQKPYNIAVIIKATDSDFWQYLLV
GALNYAVEHPDVVKVTTYGPPSEADIDRQVTILENVISTNPDAIVISSTSSDATVPALEK
AYAAGIKIITVDNKVNTDKVHTFLATDNVLGGSLAADKMVEYFKKNDIPTQGRKVAIVDA
MAGVQVLTVRTNGFINRMKQIAPEIEIIAPRYVDNDILKAMNVTNDLITTHGDSLIGIFG
NNNHSADGVARSVAERNLGNKIIVTAYDSDPEEVAAIKSGVVKAIMVQDPYGMGYKGVDF
AVRAIEGATLPEYVDTGVVIVEQHNVNDSAVQGILDPFTMKKY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagtgctgaaaaaggttgcgcttgtgtgtctggttggaatgattgccatgggt
tccttgatggcgcaggggcgtggagaacaggctgcttccgggccaaaaaatcagaagcct
tataacattgccgttataatcaaggcaacggattccgatttctggcagtatttgcttgtt
ggagcgctgaactatgctgtcgagcatccggatgttgtaaaggtcacaacgtatggacct
ccatctgaagcagacattgatcgtcaggttacgattcttgagaacgtgatttctactaat
cctgatgcaattgtcatttcttcaacaagttctgacgcgacagttccggcgcttgaaaaa
gcatatgccgcaggaatcaaaatcatcactgtggataataaggtcaacacggacaaggtg
catacttttcttgctactgacaacgttcttggtggttctttggcagcagacaagatggtt
gagtatttcaagaagaatgacatcccgacacaaggaaggaaggttgccattgtcgatgca
atggcaggtgtccaggttcttactgtcaggacaaatggatttatcaatcgcatgaagcag
attgctccagaaattgaaatcatcgcgcctcgttatgtcgataatgatatcttgaaggcg
atgaatgtcaccaatgatttgattacgactcatggggacagtttgattggtatttttggc
aataataaccactcggcggatggtgttgcccgctctgtcgcggaaaggaaccttggcaac
aagattatagtcacggcttatgattctgatcctgaagaagttgccgccatcaagagtggc
gttgtaaaagccatcatggtacaggatccatatggtatgggatacaaaggagttgatttc
gctgtacgtgccatcgaaggagcgacattgccggaatatgttgataccggagttgtcatt
gttgagcaacacaatgtaaatgattctgccgttcagggtatcttggatccgtttacaatg
aaaaaatattga
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