Parasphaerochaeta coccoides: Spico_0054
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Entry
Spico_0054 CDS
T01469
Name
(GenBank) Listeria/Bacterioides repeat-containing protein
Organism
scc
Parasphaerochaeta coccoides
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RCC1_2
RCC1
Mfa_like_1
Flg_new
Motif
Other DBs
NCBI-ProteinID:
AEC01296
UniProt:
F4GJ01
LinkDB
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Position
complement(58960..61344)
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AA seq
794 aa
AA seq
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MVILTILVLLVAFVSCVDKPNVSNSNTIRFISEIGRKATADSGWSIGDEVGIYMVEAGED
VATVATTDRDNVQYVADTADITFSGFSPVDASNPLKWDDISTPAITEFDFIAYYPYASSI
ADTTALPIHVYPGSGEQDTGKADFLWGKKAGVQNNTSTVSLTLSHALSRLVVNVGPSTTV
DKDAITGGTLVATVTGINTQATIDLDSGDVAPVVPSDIDVVMKDISGTLTDAERTAGKRR
YEAVLIPTDNTTALSSLGLRFTLGGETYEWAASSVASSDEYRIVLESGKTHVYNMTLNTA
ADEVAVAEILIGIVDWDTGSGVNAAATKAYSLTFDANSATGGSAPGRMYAHEGSQVTLPS
PGTLEKNLHYVYGWNTLPDGNGTQYAASESFTMPAHDVTLYARWVPKVKSVSAGYGHTVI
LAEDGTLWATGWNIYGQLGDGTSGYLNSKSTPVRVKASINPDDFMTNVEAVSAGDYHTMI
LKEDGTLWATGWDQDGQLGINSITTYTGIPTKVTNTNIGEIPIIRSVATGSRHTMLVSTD
DRLWGTGRNNDGQLGLGHLETPVGLPRQVKFTSGPEPFPTVASVATGANHTMIVDTDGKL
WATGNNAMGQLGDGTAGSGANKNLVVPVTTTSTGTLPAIASVIAGAYHTMIVDTNGMLWA
TGDNSSGQLGDTTMDERTIPVPITTTSTGTLPAIASVAAGDTHTMIVDTNGILWATGNNE
YGQLGDGTSGAANNKSTLVQVMTDVAAVYAGCFHTMIVKKDGTLWATGSNFNGQLGLGDS
SSGTDIKTPVQVIF
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggtcattctgaccatcctggttctccttgtcgcttttgtttcatgcgttgacaaaccg
aacgtttcaaactccaacacaatacgcttcatctccgagataggacgcaaagccaccgct
gactccggctggagtatcggggatgaagtcggcatctacatggtggaggccggtgaggac
gtggctactgtcgccacgaccgaccgtgacaatgtgcagtacgtggcagatacggcggac
atcaccttctccggcttctcccctgttgacgcctccaaccccttgaagtgggatgacatc
tccacccctgccatcacagagtttgatttcatcgcctactatccctatgcatcatccatc
gctgataccaccgctctgcccatacatgtctatccgggttccggggaacaggataccgga
aaagctgacttcctgtgggggaagaaggctggtgtccagaacaacacctcgacagtcagc
ctgacgctcagtcatgccctctcccgccttgttgtcaacgttgggccaagtaccaccgtt
gataaggatgccatcacgggcggtacgcttgtcgccactgtcacgggcatcaacacgcag
gcaacaatcgacctggacagcggagatgtggctcctgtcgtccccagcgacattgatgtc
gtcatgaaggacatctccggcacgctcacggatgcggagaggactgcgggcaagcgacgc
tatgaagccgtgttgatacccacggacaacactaccgccctgtcctcccttggtctgcgt
ttcaccttgggtggcgagacatatgaatgggctgcttccagcgtagcgtcctccgatgag
tacaggattgtcttggagagcggcaagactcatgtctacaacatgacactcaatacggcg
gcggatgaagtcgccgtcgcggagattctcatagggatagtggactgggacaccgggagc
ggggtgaacgcggcggcaaccaaggcatacagcctcacctttgatgccaacagtgccacg
ggaggcagtgctccgggacggatgtatgctcatgagggaagccaggtcacactgccgtct
cctggaacgttggaaaagaatctccattacgtctacggatggaatactctgcctgatggc
aacggaacccaatatgccgccagtgagtccttcaccatgcccgcccatgatgtgacgttg
tatgcaaggtgggtgccgaaggtcaagtcagtctccgcgggatacggtcacacagtgatt
ctggcagaggacggcacgctctgggcgactggatggaatatctatggccaactgggtgac
ggcacttcagggtatttgaacagcaaaagtacgcccgtgcgggtcaaggccagtatcaat
cctgacgacttcatgaccaatgtagaggccgtctccgccggagattatcacacgatgatc
ctgaaggaggacggcacgctctgggcgacaggatgggatcaggatggtcaattgggtatc
aacagtattacgacctacacaggcattcccacgaaggtcaccaacacaaacataggagag
atccctattatcaggtctgtcgccactggaagtcgtcatacaatgcttgtaagtacggat
gataggctctgggggactggacgcaacaatgatggtcaactgggtttaggccaccttgaa
acacccgtgggcttgcccaggcaggtcaaattcacctcagggccggaacctttccctact
gttgcctctgtcgccaccggagccaaccatacgatgattgtggatacggacgggaagctc
tgggcgacgggaaacaacgcgatggggcaactgggtgacggcactgcgggctctggagcc
aacaaaaaccttgttgtgccggtcacaaccacatccacgggaactctccccgctatcgca
tctgttatcgctggagcctaccatacgatgattgtggatacgaacgggatgctctgggcg
accggagacaacagttctggtcaactgggcgacactaccatggatgaaagaaccattccc
gtaccgatcacgactacatccacgggaactctccccgctatcgcatctgtcgccgctgga
gacacccacacgatgattgtggatacgaacgggatactctgggcgacgggaaacaacgaa
tatggtcaactgggtgacggtacttcgggtgcagcgaataacaaaagcacgctcgtgcag
gtcatgactgatgtcgcggctgtctacgccggatgcttccatacgatgattgtgaagaag
gacggcacgctctgggcgacaggatccaactttaatggtcaactaggtctgggtgacagc
agttcgggaaccgacataaaaacgcccgtacaggttattttctga
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