Parasphaerochaeta coccoides: Spico_0058
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Entry
Spico_0058 CDS
T01469
Name
(GenBank) extracellular solute-binding protein family 1
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spico_0058
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scc02000
]
Spico_0058
Transporters [BR:
scc02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
Spico_0058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
AEC01300
UniProt:
F4GJ05
LinkDB
All DBs
Position
67248..68819
Genome browser
AA seq
523 aa
AA seq
DB search
MKKNVMTIVLAIMLAMLCALPVFAQGTKESAAASAAPVKISLWYGAAITEAGPPPADWVA
LQIIREKLNIDLELTALPSNESDQDVKIQAAGAANNLPDVFMVRRDAWLRLVNQGLIAPV
DSLYAKMPVRTAAQYDSASIAFTTVSGKSYGFASPGSISKNEGLLIRKDWLDKLGLAIPK
TTEDLAKVLHAFTYNDPDGNGRNDTYGFGAFLEINNYEGGLGRRLQPILGAFGVEGTWNL
TEANAGLSVRKPEMYDAMVYIKSLVDDGSIDPNWLAYQKDDFRAAWKQGRFGVMREQNAA
YAATANYAPFDKNFPDGEWIVIDPPVGPKGHSSVGPYTTGYRIYAISAKAAQAGKAEKIA
ELLEWMSSDEGYYLLGWGVEGVNYVKDANGIPVDKDMPLGFSTATGQTVTQLRNMVFFNG
DVELYARYPKYVTEVSKKEMSALDVLRDMESRKWTPNNGGDTLPAPNADLKRFYEQGLAE
FLTGRRVLNQQNWNAWIAEFDRVGGKAWEDAGIAHAKANNLLY
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaatgtgatgaccattgtcctggcgataatgctcgccatgctgtgcgctctt
cctgtatttgcccaaggcaccaaggaaagcgccgcagcctctgctgcgccagtgaagatc
agcctgtggtatggcgccgccatcaccgaggctggtccccctccggctgactgggtggcg
ttgcagatcatccgggagaagctgaacatagatcttgagcttaccgccttgccatccaac
gaaagcgaccaggatgtgaagattcaggcggctggcgcggccaacaacctgccggatgtt
ttcatggtgcgcagggatgcgtggcttcgtctggtgaaccaggggcttattgcgccggtt
gacagcctgtatgccaagatgccggtgagaaccgctgcccaatatgactcggcaagcatt
gctttcacgacagtgagcggcaagtcctatgggtttgcttcccccggctccatttccaag
aatgaaggtctcctgatccgcaaggattggctggacaagctgggacttgccattcccaag
actacggaagacttggcaaaggttctccatgccttcacatacaatgatcccgacggcaat
ggcaggaatgatacctatggcttcggcgctttccttgagattaataactatgaaggaggc
ttgggacgccgcttgcagcctatacttggtgccttcggagttgaaggaacatggaacctg
accgaggcaaatgccggtctcagcgtgcgcaagcctgagatgtatgatgccatggtctat
atcaagagtctggtcgatgacggttcgattgatccgaactggctggcatatcagaaggat
gacttccgcgccgcgtggaagcagggacgttttggcgtcatgcgtgagcagaacgccgcc
tatgctgctacggccaactatgctccttttgacaagaacttcccggacggggagtggatt
gtcattgatcctcctgtaggcccgaagggtcattcttctgtcggcccctataccaccggc
taccgcatctatgcaatcagcgccaaggccgcccaggctggcaaggctgagaagattgcc
gagcttctggaatggatgagcagcgacgagggttattatctcctgggttggggcgttgaa
ggcgtgaactatgtcaaggatgccaatggtattcctgttgacaaggatatgccgctgggc
ttctcgaccgccacagggcagactgtcacccagttgcgcaacatggtgttcttcaatggc
gacgttgaattgtacgcccggtatccgaagtacgtgaccgaggtaagcaagaaagaaatg
agcgctctggatgtcttgcgtgacatggaaagccgcaagtggacgccgaacaacggcggt
gacacgcttcccgctccaaacgccgacctgaagcgtttctatgagcagggtcttgccgag
ttcctgacgggcaggcgtgtgttgaaccagcagaactggaatgcatggattgctgagttc
gaccgtgtcggtggcaaggcatgggaagatgccggcattgcccacgccaaggcgaacaac
cttctgtattag
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