Parasphaerochaeta coccoides: Spico_0077
Help
Entry
Spico_0077 CDS
T01469
Name
(GenBank) transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
scc
Parasphaerochaeta coccoides
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scc03000
]
Spico_0077
Transcription factors [BR:
scc03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Spico_0077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_Tnp_ISL3
HTH_3
HTH_7
HTH_26
HTH_23
HTH_38
HTH_28
Sigma54_DBD
HTH_17
MarR_2
DUF3964
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AEC01319
UniProt:
F4GJ24
LinkDB
All DBs
Position
complement(89440..90462)
Genome browser
AA seq
340 aa
AA seq
DB search
MVSIKDIARIADVSVSTVSRIINNKKGVNLEKQARVLQAIKSTGYVPNKAARDMVMKRTF
TVALIIPDTFNIFQRQLFSNIEHHLQKFGYRTVFYFVAMGPDGEDDCFQRVKSERTDGII
MLQEIQLHAFYEYLESNKIPCVITTFEKDEWTSTSIHVSEEEAAHAAVNHLIQLGHRRIS
LICGKRYSFSLERKRGYRNALEYAGLKYDENLVVYVDSYSVLSGGEGMRELMKRNTPFTA
VFAVTDELAIGAMRELKDHGISVPQDVSIVGFDDIEISSFTIPRLTTIRQPLGEMAQTSV
AMIHSLITSENHLNVNIAMPSQLIIRESTSTLNGNAQDGT
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggtaagtatcaaggatatcgcaagaattgctgacgtgtctgtttccaccgtatccagg
attatcaacaacaaaaagggcgtgaaccttgaaaaacaggcgcgggtgcttcaagcaata
aaatctaccgggtacgtgccgaacaaggccgcccgtgacatggtgatgaaacgaacattc
accgtcgccctgataattcctgataccttcaacatattccaacgacaacttttctccaat
atagagcatcatctccagaaattcggatatcgcactgtcttctattttgtcgcgatgggg
cctgatggagaagatgactgttttcagagggtcaagtccgaaaggacggacggaatcatc
atgctccaggaaatccagctccacgctttttacgaatatcttgaaagcaacaagattccc
tgtgtaatcacaaccttcgagaaagatgaatggacctcgacgagcatacatgtcagcgaa
gaagaagcggctcatgccgcagtcaatcatctcatccagctgggtcacaggcgcatctcc
ctgatctgtggaaagagatactctttcagccttgaacgaaaacgagggtacaggaatgcc
ctggaatacgcaggattgaagtatgatgaaaaccttgtcgtatatgttgattcctacagt
gtcctctccggaggagaaggaatgcgggagcttatgaagcgcaatacgccgttcactgct
gtctttgcggtgacagatgagctggctatcggcgcaatgcgggaattgaaggatcatggc
atttccgtcccgcaagatgtatccatcgtaggctttgatgacatagagatttcttcattc
accattccgcgtctcacgaccatccgccagcctctcggcgaaatggctcagacatctgtc
gcgatgattcattccctcatcacaagtgagaatcatctcaacgtcaatatcgccatgccg
tcccagctgataatccgggaatcaacctcgactctgaatggtaacgcacaagacggcacc
tga
DBGET
integrated database retrieval system
