Parasphaerochaeta coccoides: Spico_0092
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Entry
Spico_0092 CDS
T01469
Name
(GenBank) Ribosomal RNA large subunit methyltransferase E
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
scc
Parasphaerochaeta coccoides
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scc03009
]
Spico_0092
Enzymes [BR:
scc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
Spico_0092
Ribosome biogenesis [BR:
scc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Spico_0092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_25
Methyltransf_23
Methyltr_RsmB-F
Methyltransf_31
TRM5-TYW2_MTfase
MTS
PCMT
Ubie_methyltran
MetW
Motif
Other DBs
NCBI-ProteinID:
AEC01334
UniProt:
F4GJ39
LinkDB
All DBs
Position
complement(109089..109709)
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AA seq
206 aa
AA seq
DB search
MATSKRNTADSYTLRARKEGYPARSVYKLEEIQKVFRIIRPGAKVLDVGAAPGSWTLYVH
REILKGKGSIVAVDLNPLSLNPLPPSVMEFTGDAFSEDIRSLLVVNGPYDAIISDAAPMT
TGNRMVDVARSENLAESVLSLAREHLKPHGNLVIKIFQGGGHNAVLADVKKYFIKSKTFK
PAACRSDSFETYIIGLDLKKEVMEKG
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagtaagagaaacacagcggattcctacacattgagagcccgcaaggaaggc
tatcccgcacgctcagtgtacaagctggaagaaatccagaaggttttccgcatcatcaga
ccgggagcgaaagtcctggatgtcggggcagcacccggttcatggactctctacgtccac
cgggaaatactcaagggaaaaggttccatagtcgccgttgacctgaatcctctttccctc
aatcccctgcccccttcagtcatggaatttactggcgatgcattcagtgaagatatccgc
tctcttttggtagtaaatgggccgtatgatgccatcatcagcgatgcagcgccaatgaca
acaggcaataggatggtcgatgtggcgcgcagcgaaaacttggcggaaagtgttctgtct
cttgcccgtgaacacctgaaaccccatggcaacctggtgatcaagattttccagggaggc
ggacacaatgccgtgcttgccgatgtgaagaaatatttcatcaaaagcaagactttcaag
cctgcggcgtgtcgttctgattcatttgaaacctacatcatcggactggatctaaagaaa
gaagtaatggaaaaagggtga
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