Parasphaerochaeta coccoides: Spico_0097
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Entry
Spico_0097 CDS
T01469
Name
(GenBank) bifunctional carbohydrate binding and transport protein
KO
K10439
ribose transport system substrate-binding protein
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc02010
ABC transporters
scc02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spico_0097
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Spico_0097
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scc02000
]
Spico_0097
Transporters [BR:
scc02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Spico_0097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
DUF3798
Peripla_BP_3
DUF7382
Motif
Other DBs
NCBI-ProteinID:
AEC01339
UniProt:
F4GJ44
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All DBs
Position
115669..116640
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AA seq
323 aa
AA seq
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MKKVIVITFVLLLCLVGVAFAGGNKEAAGSQGTGKPLRAVWCSAMNNESQPFAYKMFKKY
MAQYNIEISVLDDQGDAAKQAANVAQAVAANYQWIIVNPTDAAGIVTAFKAAKEARPNII
ISTYSSDVPDDAERYRDFFVGMDDATAGAVAANAFIEKFPNGGNIVEIGGQAGHNAQILR
HDGFISVMKDHPEFKILDIQNTEHWATDEAQSIMEDFITKYGKKIDAVFVHWDNGATGVI
SAVQAAGLNGIVIVGVDGCKAGFDQVREGTQYATIMNNFETQSIASLELVSKLLAGEKVA
SNNYAEMDIVTLANINEFTTPEW
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggtaatcgtaatcacatttgtattgttgctgtgtctggttggagttgcattt
gctggcgggaacaaggaagccgccggttctcaaggaacaggcaagcctctccgcgctgtt
tggtgttcggctatgaacaatgagtcccagccgttcgcttataaaatgttcaaaaagtat
atggctcaatacaacattgagatttctgtcttggatgatcagggtgatgccgccaagcaa
gcagcgaacgtcgcccaggctgtagcagcgaattaccagtggatcatcgtcaatcctacc
gatgccgctggtatcgtgactgctttcaaggctgccaaggaagctcggccaaacattatc
atttctacgtattcatctgatgtccccgacgacgcggaacggtatcgtgatttctttgtc
ggcatggatgatgccactgccggtgccgttgctgccaatgcattcattgaaaagtttccc
aatggaggcaacatagtcgagataggaggacaggctggtcataatgcacagattcttagg
catgatggtttcatatctgtcatgaaggatcatccggaattcaagatcctcgatattcag
aacaccgaacattgggcgactgacgaagctcaatctatcatggaagatttcattaccaaa
tacggtaagaaaattgatgcggttttcgttcattgggataacggcgcgacaggtgtgatt
tccgcagtgcaagctgctggcttaaacgggattgtaatcgttggcgtcgacgggtgcaag
gctggttttgaccaggtcagggaaggtacccaatatgcaacgatcatgaataactttgag
actcagagcattgcttccctggaacttgtttcaaaacttctggctggtgaaaaagtcgct
tccaataactatgcggaaatggatatcgtcacactggcgaacatcaatgaattcacgact
cctgaatggtag
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