Parasphaerochaeta coccoides: Spico_0172
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Entry
Spico_0172 CDS
T01469
Name
(GenBank) Xenobiotic-transporting ATPase
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spico_0172
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scc02000
]
Spico_0172
Transporters [BR:
scc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Spico_0172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DUF87
Zeta_toxin
AAA_29
ABC_ATPase
AAA_21
NB-ARC
nSTAND3
AAA_23
AAA_16
AAA_25
AAA_22
AAA_24
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AEC01410
UniProt:
F4GJY5
LinkDB
All DBs
Position
complement(197132..198865)
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AA seq
577 aa
AA seq
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MFKLMKHLRNYRKEVIIGPLLKFLEVICELALPTIMALAINNGVIMQDKSYVLKMGGLMV
ILAFAGFACAWVCQRVASYTSQGFGTMLRDKLFSHIMSLSPGQVRDMGASTLTNRLTNDV
NQMQLWVAMMIRLVSRSPFIIIGSLIMAFSLDVRLALILLAATPFLGLIIYLLTRFTSPL
YRSYQSRLDILGRRVKENLSGVRVIRAFSKEDYEEKRFASDNNGVRDTGLGIGRLSALYS
PLTSLVVNLVILTILWQGGIHIEGGTLSQGDLIAFISYVNQILVALLVLANLIILFTRSL
AAAGRINHVFDITPDIIENPRFPETPAIAGEAVGFSHVRFGYNMTGEPVLDNADFTIPRG
KVVGIIGATGSGKSTIAALILRFFDVMEGSVRVDGRDVKDYPLTVLREKIGFVPQKTKLF
SGTIADNIRWGNPGAPDEQVRHAATLAQAHDFIMEMPAGYDSPVSRDGRNLSGGQKQRIA
VARALIRQPDILILDDATSALDFRTEALVRTAIRRDAPDRTMFIISQRAGIVKDADIIIV
CDNGRIAGIGSHASLHESCGVYRNICMSQLTGQEAAS
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaactgatgaagcatctcaggaactacaggaaagaagtcatcataggacctttg
ctcaagttccttgaggtaatctgcgaacttgcattgccgaccatcatggccttggccatc
aacaatggtgtcatcatgcaggacaaatcctatgttctgaaaatgggcggacttatggtg
atactggccttcgcaggctttgcgtgtgcctgggtatgccagcgcgttgcctcctacaca
tcccagggcttcggtaccatgctgagggacaagctgttcagccatatcatgagcctttcg
ccgggacaagtccgggatatgggagcctccaccctcactaatcggctgacaaatgatgtc
aaccagatgcagctctgggtagccatgatgatacggcttgtctcacgttcccccttcatc
atcatcggttccttaatcatggcgttctcccttgatgtccgtcttgcgctgattcttctg
gcagccaccccgttccttggtctgatcatctacctgttgacccgcttcacctcaccactc
taccgttcctaccagagccgtctggacatcctcggcagacgtgtaaaggaaaacctgtcc
ggggtcagggtcatccgcgctttctcaaaggaagactatgaggaaaagagattcgcctct
gacaacaatggtgtacgcgacactgggcttggcataggaagactttccgcgctttattct
ccgctgacatccttggtggtgaatctagtaatcctgacaatactctggcagggaggcata
cacatagaaggcggtacgctttcccaaggtgatttgattgccttcatttcctatgtgaac
caaattctggtcgctttgctggtattggcaaacctgattattctctttactcgttccttg
gccgcggcaggaagaatcaaccacgtgtttgacataactccggatatcatagaaaatcca
cgctttcctgagactccggccattgctggcgaggcggtggggttctcccatgtgcgcttc
ggttacaacatgacgggggaacctgtcctggacaatgccgacttcaccattccccgtgga
aaggtcgtcggcatcatcggagcgaccggaagcggcaagtccaccatcgccgcgctgatt
ctccggttcttcgatgtcatggaaggttcagtcagggtcgatgggcgggatgtgaaggat
tatcctttgactgtgctgcgggagaagataggctttgttccgcagaaaaccaaactattc
tcaggaaccatcgcggacaatatccgttggggaaatcctggagcgcctgacgaacaggtc
agacatgccgccacccttgcccaagcccatgatttcatcatggagatgccagcgggatat
gactccccggtgagccgggacgggcggaatctttcaggaggccagaaacagaggattgcc
gttgcccgcgctttgatcagacagccggacatcctcatcctcgacgacgcgaccagcgcc
cttgacttccggacggaagccttggtacgtaccgccatccgacgggacgctcccgaccgt
acaatgttcatcatctcccagcgtgccggaatcgtaaaggacgccgacatcattattgtc
tgtgacaatgggcgcatagccggaatcggttcccatgccagcctccatgaatcctgcggt
gtatacagaaatatctgcatgtcacagctcaccggacaggaggctgcttcatga
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