Parasphaerochaeta coccoides: Spico_0259
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Entry
Spico_0259 CDS
T01469
Name
(GenBank) extracellular solute-binding protein family 1
KO
K10117
raffinose/stachyose/melibiose transport system substrate-binding protein
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spico_0259
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scc02000
]
Spico_0259
Transporters [BR:
scc02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
Spico_0259
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
AEC01490
UniProt:
F4GKT1
LinkDB
All DBs
Position
285870..287126
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AA seq
418 aa
AA seq
DB search
MRRIRFITCAVILIVCMVSVFAGGSKESVASGPKLVYWSMWNEAEPQGRVIGEAIEAFTA
ETGIAVEVVFNGREIRKTLQPALEAGEVIDIFDEDIERVLNVWGKYLLPLDEFASKTYPT
TGGKPYRDVISKTLVDLTTNLAGGTLKNIPYQPFIFVTMYNKDLFEKAGISKVPQTWNEF
LTACEKLVAIGVTPLTVDDAYMAAFFGYNMVRLVGIEETARMAKENDFSGPQVLEFGKIW
EEMARKGYMSKKAASNIYPAGQVEEIAQGKVAMYLNGTWLPNEIKGNAPNMRWGAFSWPT
ISPNGDGAEANNFGGQSFAINKNTKYPAEAFQLIVWLTTGKWDTELAAESLGVPMGTESQ
WPLELAEAKKALDNTTKRMAWAGNMEDNPDINAKIKENFAKLITGSINAEGFAAGMRK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaataaggttcatcacatgtgcggtcattctgattgtgtgcatggtctccgtg
tttgccggaggaagcaaagagtctgttgcatcaggaccaaaactagtctattggagcatg
tggaatgaggcagagccccagggtcgcgtaattggagaagctatcgaggcttttacagcc
gaaaccggtattgctgtcgaagttgtcttcaatgggcgtgaaatccgaaagacattgcaa
cctgcgcttgaagcaggagaggtcattgatatctttgacgaggatattgaacgcgtactc
aatgtatgggggaaatatctgttgccgttggatgaatttgcatccaagacatatccgacg
accggtggcaagccctatcgtgatgtcatcagcaagacgctcgttgacctgaccaccaat
ctggcgggcggtacgctgaaaaatatcccttatcagcccttcatcttcgttaccatgtat
aacaaggatctttttgagaaagcgggaatctccaaagtaccgcagacatggaatgaattc
ctgacggcctgtgagaaacttgttgccatcggagtgacgcctcttaccgtggatgatgct
tacatggcggcgttcttcggctataatatggttaggctggtgggtattgaagagactgcg
cggatggccaaggaaaatgatttttcagggccgcaagtgcttgaatttggcaagatatgg
gaagaaatggcaagaaaaggctacatgagcaagaaagccgcttcaaacatatatcctgcc
ggacaggtcgaagaaattgctcagggaaaggtagcgatgtacttgaacggtacgtggctt
cccaatgaaatcaaaggcaacgctccgaacatgagatggggagccttctcctggccgacc
atttctccgaacggagacggcgccgaggcaaataactttggcggtcagagcttcgccata
aacaagaataccaaatatcccgccgaagcgttccagcttatcgtctggctgactacggga
aaatgggacacggaacttgccgcagaaagccttggagtacccatgggtacggaatcccag
tggcctctggagttggcggaagcaaagaaagcattggacaatacgaccaagcgcatggca
tgggccggaaacatggaagacaatcctgacatcaacgcgaagatcaaggaaaactttgca
aagttgattactggttccatcaatgcggaaggatttgcagcgggaatgcggaaataa
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