Parasphaerochaeta coccoides: Spico_0288
Help
Entry
Spico_0288 CDS
T01469
Name
(GenBank) HhH-GPD family protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Spico_0288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scc03400
]
Spico_0288
Enzymes [BR:
scc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Spico_0288
DNA repair and recombination proteins [BR:
scc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Spico_0288
Prokaryotic type
Spico_0288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
DUF5805
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AEC01518
UniProt:
F4GH43
LinkDB
All DBs
Position
322581..323564
Genome browser
AA seq
327 aa
AA seq
DB search
MPPEQSLKQRPKKKDLPLFPIFPELSADEASTYASGGIAWDSLSSDAERDAAISHFMGTV
LDFRHRHGRHFPWQQTRDPWPILLSEVMLQQTTTARVLEKYRLFLEIWPDFRSMASVSLV
DLLAAWSGLGYNRRALALRQTAIRSEEWGWTLPDDRESLLSLPGIGASTAAAIRCFCYDL
RDIYLETNVRRAVLHWFFPDEEGVKDKRIEPILLYAAKRVDDIRQWYYALMDYGVLLARL
VPNPNRRSSSYARQTAFKGSDREIRGRIIFMLTHQGPRDKVALMEALGSSDEARLQSILD
ALQAEGFIEERPASMAAENSPLYGVKK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcctccggaacaatctctgaaacaacgaccaaaaaagaaagatttgcctctttttccg
attttccctgaactgtcagcagatgaagccagtacgtatgccagtggaggcatagcgtgg
gactctctatcttccgatgctgaaagggatgcggctatttctcatttcatggggacagtc
cttgattttcgccatcgccatgggaggcacttcccttggcagcagacgcgtgatccatgg
ccgatcctgctcagcgaggtgatgctccagcagaccaccaccgcccgtgtcctggagaag
tacaggcttttcttggaaatatggccggactttcgttccatggcttcggtttcccttgtg
gatttgcttgctgcatggtcaggtttggggtacaacaggagggcgcttgctttgcgtcag
acggcaatcaggagcgaggaatgggggtggacgctacctgatgaccgtgagagtcttctt
tccctgcctgggataggggcgtccacagccgccgccatccgctgtttctgctatgacttg
cgtgatatctatctggagacaaatgtccggcgtgctgtcctgcactggttctttcctgat
gaggaaggggtcaaggacaaaaggattgaaccaattcttctctatgccgccaagagggtg
gacgacatccggcagtggtattacgcgctgatggactacggcgtcctgcttgcccggttg
gttcccaatcccaacagacgtagttcttcctatgcccgtcaaacagcattcaaaggttct
gaccgagagatacggggcaggattatattcatgctgacccaccaaggtccccgtgacaag
gttgctctcatggaggctctgggcagcagtgatgaagcacgtctccagtccattctggat
gcattgcaggcagaaggtttcattgaagaacgtccggcttccatggctgcggagaatagt
cctctttatggggtgaagaagtga
DBGET
integrated database retrieval system
