Parasphaerochaeta coccoides: Spico_0342
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Entry
Spico_0342 CDS
T01469
Name
(GenBank) L-arabinose isomerase
KO
K01804
L-arabinose isomerase [EC:
5.3.1.4
]
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc00040
Pentose and glucuronate interconversions
scc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Spico_0342
Enzymes [BR:
scc01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.4 L-arabinose isomerase
Spico_0342
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Gene cluster
GFIT
Motif
Pfam:
AraA_N
Arabinose_Iso_C
AraA_central
Motif
Other DBs
NCBI-ProteinID:
AEC01572
UniProt:
F4GHN4
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All DBs
Position
390948..392432
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AA seq
494 aa
AA seq
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MGKKIFSDYEFWFVVGSQFLYGTETLDKVAEHAQVIARGLDGSRHVPARVVYKATVKTPD
EITTVVKEANHTDSCAGLIVWMHTFSPSKMWINGLSLLQKPYAHLHTQFNRNIPDEDIDM
DFMNLNQSAHGDREHGFIAARMHLKRKIIVGYWADDDVMTSLGTWMRSAIGAVESRKLKV
VRFGDNMRNVAVTEGDKVGVQIQLGWQVNTWPVAELVHEMGKVTEKEIDALLSEYTELYD
MATDDSAAVRYQAREEMAIRRFLDREGALAFSNTFEDLSGMEQLPGLATQHLMAQGYGYG
GEGDWKVSAMTALLKLMTRGLKGGTAFMEDYTYDLEPGHEFSLGAHMLEVCPSLAASRPR
IEVHPLGIGGKGDPARLVFEGMPGKGIVASLVDMGGRLRLIVQDIEAVKPIYRMPNLPVA
RIMWKPEPDFKTGAHAWILAGGSHHTVLSLSATPEMLEDWAEIMDMEFVHITKETTIKGL
KQQLFLSDLAWKLK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaagatttttagcgattatgaattctggtttgtcgttggctcccagtttctc
tatggaactgagaccttggacaaagtggcggaacatgcgcaggtaatcgcccgcgggctt
gatggttcgcgccatgtgccggcgcgtgtggtatataaagctacagtcaagactcccgat
gaaatcaccactgtggtcaaggaggcgaatcacacagactcctgcgcggggctgattgtc
tggatgcatacattttcaccatcaaaaatgtggataaacggcctatccctgctccagaag
ccgtatgcgcacctgcatacccaattcaaccgcaatataccggacgaagacatagacatg
gatttcatgaatctcaaccagagtgcccatggcgaccgtgaacatggcttcattgccgca
cgcatgcatttgaagcggaaaatcattgtcggatattgggcagatgatgatgtcatgacg
agccttggcacctggatgaggtcagccattggcgcggtggaaagccgcaagctcaaggtc
gtccgcttcggagacaacatgcgtaatgttgcagtcacggaaggggacaaggttggagtc
cagatacaactgggatggcaggtgaatacatggcctgtcgccgagctggttcatgagatg
gggaaagtgacggaaaaagaaatagacgccctgctttccgaatatacggagctgtacgac
atggcgacagatgacagtgcggcggttcgttatcaagcacgggaggaaatggccataagg
agattcctggacagggaaggagccttggcattcagtaatacatttgaagatttgagtggt
atggaacagcttcccggactggccacccaacatctcatggcgcaaggttacgggtatggc
ggggaaggggactggaaagtttcggccatgacagcacttctcaagctgatgacccgcggc
ttgaagggcggcacagcgttcatggaggattatacctacgatttggaaccgggacatgag
ttctcattgggagcgcatatgctcgaagtatgtccctccctggcagcttcgcggccacgc
attgaagtgcatcctctcggaattggcggaaaaggagatcccgcgcgtcttgtattcgaa
gggatgccaggcaagggcattgtcgcctcattggtcgatatgggaggccgtctgcgtctg
attgtccaggatatcgaagcggtgaaacctatttacaggatgcctaatcttcctgtcgcc
cgcatcatgtggaagcctgaacctgatttcaagacaggtgcgcatgcgtggattcttgcg
ggaggctcccatcataccgtactgtcattgtccgcgacacctgaaatgctggaagattgg
gcggaaatcatggacatggaatttgtccatatcaccaaggaaacgactatcaaaggattg
aagcaacagctctttctgtccgatcttgcgtggaaactgaaatga
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