Parasphaerochaeta coccoides: Spico_0405
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Entry
Spico_0405 CDS
T01469
Name
(GenBank) DNA mismatch repair protein mutL
KO
K03572
DNA mismatch repair protein MutL
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Spico_0405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scc03400
]
Spico_0405
DNA repair and recombination proteins [BR:
scc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
Spico_0405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
DUF7262
Motif
Other DBs
NCBI-ProteinID:
AEC01634
UniProt:
F4GIC6
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All DBs
Position
complement(474710..476590)
Genome browser
AA seq
626 aa
AA seq
DB search
MEKTGRIKRLDPIVAQRIAAGEVIERPSSVVRELIDNAVDAGATTITVAIENGGLDLISI
MDNGSGIAPDDLPLCCESHATSKVASVDDLYHLSTMGFRGEALYSIAACSRVTIASSWHG
QSPWSMTVDNGRKEEPVPGGPSTGTKVDVEGLFKFIPARRNFMKRASAEAASCRAVMVEK
SLAFPSIEFRLLVDDSLRVHFPVTNRKERVLDALATDKNLVRSETMELTDHAGRFDLYAV
CSTPSTFRSDRSHIKVYVNNRPIEDYALVQAVTYGYGEMLPGGSFPYCYLFISVDPELAD
FNIHPAKREVKLRNKAEIHHQIVEMVRTQVRRTIPRLRGMMQEDHAADVQSDVQPELGAS
PRHQGERTADTHVASKHVTYGYGSASGYSPAPSSVAEALKNSGKPADFCWFEKARDFLQK
SGTSSAVTIKADRTAADATTWIPENASEQDFTYIGQAFSLFLIAEKDGDLYIVDQHAAHE
RILYDEIVSRKDIQKLMVPLSFDVDGDVDEYLQQNSHLYAEYGIELTRPDERQWEIMTMP
ALGKPVEKQVVDFISHHCGDMTELDKGLYAIIACHSAIRDGDTLDKMAAEEILRKVFAMA
EPRCPHGRTFLVRLSQDELRKSVGRT
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacaggacgcatcaaacggctggatcccattgtcgcccagaggattgcagcg
ggagaagtcattgaacgcccatcgtccgttgttcgtgaactcatagacaatgccgtcgat
gccggggccacgaccatcaccgtcgccattgaaaacggaggactggatctcatctccatc
atggataacggctcaggcatcgctcctgacgacctgccgttgtgctgtgaaagccatgcc
accagcaaggtggcctcggtcgatgacctgtatcatctgtccaccatgggttttcgtgga
gaagccttgtacagcattgcggcctgctcacgggtgacgatagccagcagctggcacgga
caaagcccatggagcatgaccgttgacaacggacggaaggaagaacccgtccccggaggg
ccttccactggcaccaaggtagacgtggaagggcttttcaagttcatccctgcccgccgt
aacttcatgaaaagagcctctgcggaggcggcaagctgccgtgccgtcatggttgaaaaa
agccttgccttcccttccattgaatttcggctgctggttgacgatagcctccgtgttcat
ttccctgtcacaaaccgcaaggagcgtgtccttgatgcactggctacggacaagaacctt
gtgcgttccgaaacaatggaattgaccgaccacgccggacgctttgacctgtatgccgtc
tgctcgaccccttctacgttccgttctgaccgttcccacatcaaggtgtatgtcaacaac
aggccgattgaagattatgcgctcgtacaggccgttacctatggctatggggaaatgctg
cctggcggttcattcccatactgctatcttttcatttccgtggatcctgaactagctgat
ttcaacatccatccggcaaagcgggaagtcaagctgaggaacaaggctgaaatacatcat
cagattgtagaaatggtcaggacacaagttcgccgcaccataccacgtctgaggggcatg
atgcaggaagaccatgcggccgacgtgcagtccgacgtgcaaccggaacttggcgcctcc
ccacgtcatcaaggagaacgaaccgccgacactcatgtcgcatccaaacacgtcacctat
ggttatggttccgcttcaggatattcgcctgccccgtcctctgttgcagaagccctgaag
aacagtggcaaaccagctgatttctgttggtttgagaaagcgcgtgatttcctccagaaa
tccgggacatcgtccgccgtgaccatcaaagcggacagaaccgccgctgacgccaccaca
tggatacctgaaaatgcttcggaacaggacttcacctacataggacaggcattttccctt
ttcctcatcgctgagaaagatggagatctctacatagttgaccaacatgccgcgcatgaa
cgcatcctttacgatgaaatcgtgagccgtaaggacatacagaagctgatggttcccttg
agcttcgatgtggacggagatgtcgatgaatacctccagcagaactcgcatctgtacgcg
gagtacggcattgaactgaccagacccgatgaacggcaatgggaaatcatgaccatgcct
gccctcggcaaacccgtggaaaaacaggtcgtagacttcatcagccaccactgcggcgac
atgacggaacttgacaaaggactgtatgcaatcatcgcctgccattccgccatacgtgac
ggagacacactggacaagatggctgcggaagaaatcctgcgcaaagtctttgccatggca
gaaccccgctgtccccatggtcgtacatttttggtgagactctcacaagatgagttgagg
aaatcggtaggacgcacataa
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