Parasphaerochaeta coccoides: Spico_0454
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Entry
Spico_0454 CDS
T01469
Name
(GenBank) ribosome biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc00730
Thiamine metabolism
scc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Spico_0454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scc03009
]
Spico_0454
Enzymes [BR:
scc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
Spico_0454
Ribosome biogenesis [BR:
scc03009
]
Prokaryotic type
GTPases
Spico_0454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
FeoB_N
RsgA_N
Dynamin_N
ABC_tran
GTP_EFTU
AAA_29
AIG1
Septin
Roc
AAA_16
AAA_22
AAA_21
MMR_HSR1_Xtn
ATP-synt_ab
AAA_7
AAA_23
SRPRB
ATPase
IIGP
Motif
Other DBs
NCBI-ProteinID:
AEC01682
UniProt:
F4GIH4
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All DBs
Position
536050..537054
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AA seq
334 aa
AA seq
DB search
MGEAVEGTVTRGINNIYTVIDSDGTAYLCRIKGKQLVQAAGEYNPIVAGDRVLFQPVEGS
GEALILERLERTSFFARWNEKGQRNQIVAANMDIVVCVSSVASPPFRPRFIDRVIACSRN
VETVIILNKCDIAQKDAEAERFALFSELGYRTIRVSAAQGEGLDEVRGICHGKTVAFIGQ
SGVGKSTLINALLDGTVVQRTGGISRKFDRGRHTTNYATMLFGKDFTLIDTPGVREISVP
HDDPHAIEASFPEFASYRVRCQFEGCLHDEEPGCAVRDAADAGLIHEDRYESYLRMLASL
EERAPSWAVRPRAQRNRYADDTWDKEEWDAHEDA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
gtgggagaggctgtggaagggacagtgacccgtggcatcaataatatctatacggtgatt
gattccgacgggactgcatatctctgccgcatcaaaggcaagcagcttgtccaggccgct
ggggaatacaatcccatagtcgcaggcgacagggtattgttccagcctgtggaaggttcc
ggcgaggctttgatccttgagaggcttgagcgcaccagttttttcgcccgctggaatgaa
aaaggtcagcggaaccagattgtcgcggcgaacatggacattgtcgtctgtgtttccagc
gtggcgtcccctccattccgcccgcgtttcatcgaccgggtgattgcttgcagcaggaat
gtcgagacagtgatcatattgaacaaatgcgacatcgcccagaaggatgcggaggccgag
cgtttcgcgttgttctctgagctgggctaccgtacaatccgcgtctcagcggcacagggt
gaaggacttgatgaagtcaggggaatctgccatgggaagacagttgctttcatcggtcag
tccggtgtcgggaagtctactctcatcaatgctctcttggacggaaccgttgtgcagcgg
acaggcgggatatcccggaagtttgaccgtggacggcataccaccaattatgccaccatg
ctattcggaaaagactttacccttattgatactccgggagtgagggaaatatcagttcct
catgatgatccgcacgcaatcgaggcttcttttcctgaatttgcttcgtaccgtgtccgc
tgtcagttcgagggttgcctgcatgatgaggagcctggatgcgccgtccgtgatgccgcc
gacgccgggcttatccatgaagaccggtatgaaagctatctgaggatgcttgcatcgctt
gaagaaagggcaccttcatgggctgtgcggccacgtgcgcagaggaaccgatatgctgat
gatacatgggacaaggaggaatgggatgcacacgaggacgcttga
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