Parasphaerochaeta coccoides: Spico_0455
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Entry
Spico_0455 CDS
T01469
Name
(GenBank) DNA mismatch repair protein MutS domain protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Spico_0455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scc03400
]
Spico_0455
DNA repair and recombination proteins [BR:
scc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Spico_0455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
WHD_MCM8
Baculo_PEP_C
Motif
Other DBs
NCBI-ProteinID:
AEC01683
UniProt:
F4GIH5
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All DBs
Position
537035..539386
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AA seq
783 aa
AA seq
DB search
MHTRTLEDLGFTTVTTSIATHALSSEGKEELSRDRFVRTADEWEERQLLVGDIMRLRQDS
LRPAPSGFPDISGILNLLDRPAAVLAGEDIYTVGGYIAAAREFKAFCEEQDEGKAVNPAA
GLFTAFPVTLAPVEKEIFSIMESPGTVKKSHPELAKLLRDVERIRGERQAYSREFLLKNS
QSVRNDQPVLRDGRLVIPMRSDQSSTVTGFVHGSSASGATTFMEPFPLVGLNNNVVLAEQ
KVQMCIARILSALSATVKAVLDDVKVLQCIIGEADALYACASWAGRNRCVVVHRSDDIPC
RLVGARHPLLGSKAVPVTVDIPPGIDGVVFSGPNAGGKTVTIKTVGLFALLNQFCGYVPA
EEGTSLPLFDGIFSDIGDDQSIEKEFSTFSGHLHRIGFIMKEATPRSLIILDELGSGTDP
AEGAALARAILEYCLDHAFLTLVTSHHGVLKQYAYGSDRLLNAAMEFDEEFHRPTFRVVS
GISGESHAIETARRMDLPSEVIVAAQKYLGTEAVRISTIIRDLEEKQRRARQMEEEMAQD
KKALESALAQARERSRTLLEEEVRVREDGMAQLSSYIADTRKSLENLIADLRHGEISREK
TLRAKQFIADLQEKEKKERDALVSRKDRQRTFNRTQDATLLTEGMDVLVGTARKEGRLLR
KKGKNSWEVSVGVMRMVIDEKDIHPVRRRETPVSVISYATASPRPSPILDVRGMTLDQAL
EEVSRRVEACIVHDMSGFEIIHGYGDGILAQGIGNFLDSFPAVKKRFFARPEEGGMGKTY
VEL
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcacacgaggacgcttgaggatctcggtttcacgacggtgacgacatctatcgccact
catgcgttgagtagcgagggcaaggaagaattaagcagggacaggtttgtccgcactgcg
gatgagtgggaggaaagacagctcttggtaggagacatcatgcgtctccgtcaggattct
ttgcgccccgcgccctctggctttcccgatatctccggaattctcaatctcctcgaccga
ccggcggcggttctggccggcgaagacatttacactgtcggtggatatatcgccgctgcc
cgtgagttcaaagcgttctgcgaagaacaggacgaggggaaggctgtcaatcctgcggcg
ggtctgttcacggcatttcccgtgacgcttgccccggtggagaaggaaatcttctccatc
atggaaagtcctggtaccgtgaaaaaaagccatcccgaacttgccaagctgctccgtgat
gtggaaaggatacgtggggagcggcaagcctacagccgtgagtttcttctgaagaacagc
caaagcgtccgtaatgaccaaccggtgttgcgtgacggtcgccttgtcataccaatgcgc
tctgaccagagttctacggtgactggctttgtccatgggagcagtgccagtggagcgact
accttcatggagccttttccccttgtcggtctgaataacaacgttgtgctggcggaacag
aaagtacagatgtgcattgcccgtatcctctccgccctgagtgcgacggtcaaggctgtc
cttgatgatgtgaaggttttgcagtgtatcattggtgaagctgatgccctgtacgcgtgt
gcttcatgggcagggaggaacagatgcgtcgtcgtgcatcgttcggatgacattccctgc
cgtctggtcggcgctcgacatcccctgctgggaagcaaggcggttccggtgaccgttgat
ataccaccgggcatagacggggtggtgttcagcgggccgaatgccggtggaaagacggtg
acaatcaagactgtcggactttttgcccttctcaatcagttctgcggatacgtaccggcg
gaagaaggcacatccctgcctttgtttgatggaatctttagcgacataggggacgatcag
agcatcgaaaaggagttttctactttcagcggacacctgcatcgcataggtttcatcatg
aaggaggcgactccgcgcagcctgattatccttgatgaactgggtagtggcactgatcct
gcggagggagcggctctggcgcgagctatcttggaatactgtcttgaccatgcgttcctt
actttggtcaccagccatcacggggtgttgaagcagtatgcttacggttctgaccgtctg
ctcaacgccgccatggagtttgacgaggaatttcataggccgaccttccgggtggtcagc
ggtatttcaggggaaagccatgccattgagactgcccgtcggatggatttgccgtcagag
gtcattgttgctgcccagaagtatctcggaacagaggccgtgcgaatcagtaccatcatc
agggatttggaagaaaagcaacgcagggcacggcagatggaagaagaaatggctcaagac
aaaaaagccctggagtctgcccttgcccaagccagggaacgctcccgtactttgcttgaa
gaagaagtcagggtgagggaagatggcatggcgcagctttcctcttacatcgcggatacc
cggaaaagtttggagaacctcattgccgaccttcgtcatggtgagattagcagggagaag
acgctccgtgccaagcagttcatcgctgaccttcaggagaaggaaaagaaagagcgggat
gccttggtttcccgcaaggacaggcaacgtacattcaatcggacgcaggatgctacgctc
ttgactgaagggatggatgtccttgtcggtacggcacggaaggaaggacggcttctgcgg
aaaaagggaaaaaactcatgggaggtttcggtaggggtcatgcgtatggtcattgatgag
aaagacatccaccctgtcaggagaagggagacgccagtttcggttatctcctatgccacg
gcttctcctcgtccgtctccgattctcgatgtacgggggatgacgttggatcaggcgctt
gaggaagtttcccgccgtgtggaggcttgcattgtccatgatatgtctggttttgagatt
attcacggttatggggacgggatacttgcccaaggcatagggaatttccttgattccttt
cccgcggtaaagaagcgtttcttcgcacgcccggaggagggcggtatggggaagacctac
gtggagctgtaa
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