Parasphaerochaeta coccoides: Spico_0500
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Entry
Spico_0500 CDS
T01469
Name
(GenBank) extracellular solute-binding protein family 1
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spico_0500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scc02000
]
Spico_0500
Transporters [BR:
scc02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
Spico_0500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
AEC01728
UniProt:
F4GJ88
LinkDB
All DBs
Position
complement(583184..584779)
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AA seq
531 aa
AA seq
DB search
MCKRSRIIMAVLLVLLVAGMASAQGVRSTAPTEADNFIPSGTKIVENKITLRGYGSKFAG
NAEWDDNMLVWRELEKRTNVRIEWETVVNTEARTKAQTLFAADDLPDLFLKNALNMSDVV
KFSASGHLVDLKQYMDAGLMPNFKEAYDNDVNLRIALTTADGKIYTLPAYYPDDIDTTRR
FMYVNETWLNRVGKRKPTTLTELYDVLKAFRDLDANGNGDPNDEYPIAFGNVNETEKTAR
ALAGIDDIFGQPFNVINGQLTQMYTSDNMKEAWRFLAKLYAEKYLEPDLFTKTTTEFFAR
LANDQYGVTLLLPPADSSQFGILEPSFGILGKENVIWNWKVSPLLGVATFAITTKNPYPR
ETARWIDYLYGDDGSTLVRMGVEGDTYVTNADGSLSYSEKIKSDPQGVEFAMAKYSFWLQ
PNATPGRYTAKQTLPLFEGTLTPSAIPVFAPYNTKHAYSLPSLPADIERERTTLLGEINK
YYSESRAAFMTGKLDIDKDWNIYVTTLKQLKVDRLQEIYRQAYAIVQDALK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaacgatccaggatcattatggccgtgctgctcgtcctgcttgtcgcagggatg
gcgtcagcccagggtgtaaggagtacggcaccgacggaggcagacaacttcatcccttcg
ggtacgaaaatcgtcgagaacaagatcaccctcaggggctacggatcaaaatttgcgggc
aacgccgagtgggatgacaacatgcttgtctggcgcgaactggaaaagcgcacgaacgtc
cgcatagagtgggaaacggtggtcaacaccgaagcgcgtaccaaggctcagacactgttt
gcggccgacgacctgcccgacctgttcctcaagaacgccctgaacatgagcgacgtggtc
aagttctcggcttccggccatctggtagacctgaagcaatacatggatgctggtctgatg
ccgaatttcaaggaggcctacgataacgacgtgaacctgcgcatcgcgctgacgacggct
gatggcaagatctacacactgccggcgtactatcccgatgatatcgatacaaccagacgc
ttcatgtacgtcaacgagacttggctgaatcgcgtgggcaagcggaagccgaccacgctg
accgaactgtatgatgtgttgaaagcgttccgcgacctcgatgccaacggcaacggcgat
ccgaacgacgagtatcccattgcgttcggcaatgtcaatgagacggagaagacagcccgc
gctctggcaggcatcgacgacatcttcggccagccgttcaacgtgatcaacggccagctg
acgcagatgtacaccagcgacaacatgaaggaagcctggcgcttcctggccaagctctat
gctgagaaatacctcgaacccgacctgttcaccaaaactacgaccgagttcttcgctcgc
ctggccaatgaccaatacggcgtgacgctgctgctgccaccggccgattcgagccagttc
ggcatccttgagccttccttcggcatcctgggcaaagaaaacgtgatctggaactggaag
gtttccccgctgcttggcgtggctaccttcgccatcaccaccaagaacccctacccgcgc
gagacggcacgctggattgactatctctacggcgatgatggttccacccttgtgcgcatg
ggcgtcgagggcgatacatacgtcaccaacgccgacggctcgctgagctatagtgagaaa
atcaagagtgatccgcagggcgtcgagttcgcgatggccaagtattcgttctggcttcaa
ccgaatgccactcccggtcgctacactgccaagcagacgttgcccctgttcgaagggacc
ctaacgccgtcagccatccccgtcttcgctccctacaacaccaagcatgcctacagtctg
ccgagcctgccggcggatatcgaacgggagcgcaccacgttgctgggtgagatcaacaag
tattactcggaatcccgcgccgctttcatgactggcaagcttgacatcgacaaggactgg
aacatctatgtgaccaccctgaaacagttgaaggtcgatcggctccaggaaatctaccgc
caggcttacgcgattgtacaggacgcgctgaagtga
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