KEGG   Parasphaerochaeta coccoides: Spico_0509
Entry
Spico_0509        CDS       T01469                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
scc  Parasphaerochaeta coccoides
Pathway
scc02024  Quorum sensing
scc03060  Protein export
scc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:scc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Spico_0509
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Spico_0509
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Spico_0509
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:scc02044]
    Spico_0509
Enzymes [BR:scc01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Spico_0509
Secretion system [BR:scc02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Spico_0509
  Eukaryotic Sec-SRP protein
   Spico_0509
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 cobW AAA_33 nSTAND3 nSTAND_NTPase7 AAA_30 DUF7750 ParA APS_kinase AAA_31 AAA_17 ArsA_ATPase ResIII Zeta_toxin AAA_18 NNH2 Thymidylate_kin
Other DBs
NCBI-ProteinID: AEC01737
UniProt: F4GJ97
LinkDB
Position
595024..596358
AA seq 444 aa
MFESISQKFSGIMRSLSGKSKISEKNVRDAVEEIKLALLDADVNLRVVRRFVNGTLDEAL
GEKVLSAVDPGQQFVKIVYDRMVALLGDPEGQKLSLRGPDVVTVILMMGLQGSGKTTTSA
KLALRLKKEGRRPLLAAADLVRPAAIDQLQVLGSKVDVPVHVLPGASDPVKVAVDALARA
KREQRDVLIIDTAGRMHLDDTLMTEIKKVRDAVKPDETLFVADAMTGQNAVSIAEEFEKR
IGISGVILSKFDSDARGGAALSLRSVVGKPIKFIGVGEKPEDFEPFYPERMASRILGMGD
IVSLVEKAQETMDIEEAEKMQRKMAKNTFDLQDYLEQLDRMTKMGGVGKMLEMIPGTQGQ
ISEDDIDKAELKREKAIIQSMTYTERENCHIIGPTRRKRIARGSGSSVNDVNRLLRKFEK
MRLTMKKFAKNKKYQAEMLKQMGI
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgttcgagtcaatcagtcagaaattcagcggtatcatgcgctcattatcgggaaagtcg
aagatttccgaaaagaatgtgcgggatgctgttgaggaaataaagcttgccttgcttgat
gcggatgtcaacctgcgtgtcgtcaggcgtttcgtcaatggaactctggatgaggcattg
ggcgagaaagtgttgtctgcggttgatccaggccagcagttcgtcaagattgtctatgac
cgcatggttgcgctgcttggtgatccagaggggcagaaactcagtcttcgaggtccggac
gtcgtcactgtcatcctcatgatgggtctccaaggttcaggtaaaaccactacatcagca
aaacttgccctccgtctcaagaaagaaggcagaagaccactccttgccgccgccgacctg
gtgcggcccgcagctatcgaccagcttcaggttcttggctcaaaggttgatgttcctgtc
catgtacttcccggagcatcagatccagtaaaagtcgccgttgacgctcttgcgcgcgca
aaacgtgagcagcgcgatgtgctaatcatcgacacagccggacggatgcatcttgacgat
accttgatgacagagattaaaaaggtgcgcgatgccgtcaagcccgatgagaccctgttc
gtagctgatgccatgaccggtcaaaatgcggtgagcattgccgaagaatttgagaaaaga
ataggtatcagtggtgtcatcctcagcaagttcgattccgatgcccgaggtggcgccgcg
ctttcgttgcgctccgtagttggcaagccgataaagttcataggcgtaggtgagaaacca
gaagactttgagcctttctatccggagaggatggcaagccgtatcttggggatgggcgat
atcgtttcccttgtggagaaagcccaagagaccatggatatcgaggaagccgagaaaatg
cagaggaagatggcgaagaacaccttcgacctgcaagattatctcgaacagctcgaccgc
atgaccaagatgggtggagtaggcaagatgctggagatgattcccggaacacagggacaa
atcagtgaagatgacatcgacaaggctgaattgaaacgtgagaaagccatcatccaatcc
atgacctatacggaacgagagaattgtcatataatcggtcctacgcgccgaaaacgcatt
gcacggggcagtgggtcgagcgtgaatgatgtgaacagacttctgcgtaagtttgaaaag
atgagacttaccatgaagaaattcgcaaaaaacaagaaataccaggctgaaatgttgaag
cagatgggtatataa

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