Parasphaerochaeta coccoides: Spico_0529
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Entry
Spico_0529 CDS
T01469
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Spico_0529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scc03019
]
Spico_0529
Enzymes [BR:
scc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Spico_0529
Messenger RNA biogenesis [BR:
scc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Spico_0529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AEC01757
UniProt:
F4GJB7
LinkDB
All DBs
Position
614765..616096
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AA seq
443 aa
AA seq
DB search
MLIRYKQDERGKSIPVARIYTRGEHGIDDSLIDADAAWSVRKLQQSGAEAYIVGGAVRDL
LVGHVPKDFDIATNASPRQVQRMFWNARIIGKRFKLVHLVFNDKILEVSTFRSDEEMAED
GSNNVFGTIEQDARRRDFTINALYYDPMTGHLLDFNDSLQDFKKKRIRSLIPLKETFIED
PVRMIRAIKYAVSTDFSLPLSLRMAIRSHSRELSRASVSRLTEEVNKILASGVSARIFRK
LKDYQLLGYMLPGIAPHIGTPAMNASLEAMDDAVMSAKHGRGSAVSRGEMIKALVAPLVS
LGDASLSVDERFKEVYKSIKAIIAPMTPSNYEIELACERILRENGFRTPRNCVRPRPSGI
RPPGQARRKGGRQESGRRRQSPKAVKPGVKQLDMEESASVTAPGTEADMPKTSSRPKRKR
PHRRRKKSPATATQQQADSVAVE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgctgatacgatataagcaggatgaacggggaaaaagtattcctgttgccagaatctat
acacgcggggaacacggcattgatgattccctgattgatgccgacgcggcatggtcggtt
cggaaacttcaacagtccggagccgaggcatatatcgtcggtggagcagtgagggatctg
ctggtaggtcatgtccccaaggatttcgacattgctaccaacgccagtccacgccaggtt
cagaggatgttctggaacgcgcgaatcatcggaaaacgtttcaaacttgtccatcttgtc
ttcaatgacaagatattggaagtctcgaccttccgtagtgatgaggaaatggcggaagac
ggaagcaacaatgtcttcggtacgatagagcaggatgcccggcggcgggactttaccata
aacgctctctattatgacccgatgacagggcatctgctggatttcaatgattccctccag
gatttcaagaaaaaacgcatcagatccttgattccgctcaaggaaaccttcattgaggat
cctgtgcggatgatccgcgccatcaaatatgctgtatccacggatttttccctgccgttg
tccctccgaatggccatcaggagtcattccagggagctgtcacgtgcgtcggtaagccgt
ttgaccgaggaagtgaataagatactcgcgtcgggtgtttccgcgcgaatcttcaggaaa
ttgaaagattaccagcttctcggatacatgctccccggcatagctccccatatcggaacc
ccggcaatgaacgcatcccttgaagcaatggatgacgcggtgatgtcagccaagcatggc
cgtggctccgcagtctcccgtggggagatgataaaggcattggttgctccccttgtctcc
cttggcgatgcatcgctttccgttgatgagaggttcaaggaagtctataagtccatcaag
gccatcattgctcccatgacgccgagcaactatgagattgaactcgcttgcgaacgcata
cttagggaaaatgggttccgtaccccgcgcaattgtgtacggcctcgaccgtccggcatc
cgtcctcccggtcaggctcgtcggaaaggggggaggcaggagagcggacgccgtcggcag
tcaccgaaagcggtcaagcccggagtcaagcagctggacatggaagaatctgccagtgtg
actgcccctgggaccgaagctgatatgccgaagacgtcttcccgtcctaagcgcaagcgt
ccgcacaggcgcaggaaaaaaagccctgcaactgccacgcagcagcaagcggactctgtc
gccgttgaataa
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