Parasphaerochaeta coccoides: Spico_0583
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Entry
Spico_0583 CDS
T01469
Name
(GenBank) Crossover junction endodeoxyribonuclease ruvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Spico_0583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scc03400
]
Spico_0583
Enzymes [BR:
scc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Spico_0583
DNA repair and recombination proteins [BR:
scc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Spico_0583
RecFOR pathway proteins
Spico_0583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
AEC01811
UniProt:
F4GK39
LinkDB
All DBs
Position
668612..669166
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AA seq
184 aa
AA seq
DB search
MSSRLRPIWNFLMTLLTKTNSMRILGIDPGLAQTGWGVVDIIDQRYRPVSFGVVTTATSQ
DLGLRIHYIASNIGRLAAEHEVVMVAMEDVFFTKNISSAIPVAKVIGAIMHQLAGQGLDV
KMFSPPQIKTAVTGYGSAEKHQVQEMMRLMLDLKEIPKPNHSADALAVAVCCASYSSTER
RLGG
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaggttgcgaccaatctggaacttcctgatgactttactgacgaagacgaat
agtatgcgcattcttgggattgacccaggattggcacagacaggctggggtgtggtcgat
atcatcgaccaacgctaccggcctgtttcgtttggggtggtgacgactgcgacaagccaa
gaccttggcctgcgcatccattacattgcctccaacataggacgattggccgctgagcat
gaagttgttatggttgccatggaggatgtcttctttacaaagaacatcagcagtgccatt
ccggttgccaaagtaatcggagccatcatgcatcagcttgcagggcaggggcttgacgta
aaaatgttcagtcctccccagataaagacagcggtcactggctatggtagcgcagagaag
catcaagtacaggagatgatgagactgatgcttgatttgaaagaaatacccaagccaaac
cacagtgccgatgctctggcagttgctgtctgctgtgcatcctacagctcaacggaaaga
cgcctgggaggctga
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