Parasphaerochaeta coccoides: Spico_0585
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Entry
Spico_0585 CDS
T01469
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Spico_0585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scc03400
]
Spico_0585
Enzymes [BR:
scc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Spico_0585
DNA repair and recombination proteins [BR:
scc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Spico_0585
RecFOR pathway proteins
Spico_0585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
nSTAND3
AAA_14
AAA_22
Sigma54_activ_2
Mg_chelatase
AAA_16
TIP49
Sigma54_activat
RNA_helicase
AAA_3
NB-ARC
ABC_tran
AAA_18
bpMoxR
NTPase_1
AAA_PrkA
IstB_IS21
TsaE
DUF815
NPHP3_N
AAA_28
NACHT
AAA_33
AAA_17
AAA_19
AAA_24
PhoH
Rad17
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AEC01813
UniProt:
F4GK41
LinkDB
All DBs
Position
669889..670959
Genome browser
AA seq
356 aa
AA seq
DB search
MDITGENFESVESLEQNSVLSMTFQRQGDETENLLRPQRLKDFQGQQKLKDNLSVFITAA
RERNEALDHVFLIGPPGLGKTTLATIIANEMNAEIRMTSAPALDKPKDLAGILTNISENS
VFFIDEIHRLKPALEEMLYIAMEDYEIDWVIGQGPAARTMRIPLPRFTLIGATTKAGQVS
SPLHSRFGITCHIDFYNENELSGIILRSSGIVGTEITPDAVSLLARCSRGTPRIANRLLR
RLRDFADVIGTGIVDVDIVHEGMKRLGIDLNGLDEQDRNILRTIIEFYDGGPVGADTLSI
SVGEASESLEDFYEPYLIQKGYLKRTPRGRMVTRKAYELLGIPCERKMDEDQGILF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaccggagaaaactttgaaagtgttgagtcccttgagcagaattctgtcctg
tccatgactttccagcgccagggggatgagacggaaaaccttctccgtccccaacggctt
aaggatttccaaggacagcaaaaactcaaggacaacctttcggtattcataactgctgca
agggagcggaatgaagctctggatcacgtcttcctgattggtcctcctggccttgggaag
acaacgcttgccaccatcatcgcaaatgaaatgaacgctgaaatccgcatgacaagcgct
ccggccttggacaaaccgaaggatctggccggcattttgaccaatatcagtgagaatagc
gtgtttttcatagatgaaatacatcgcctgaagcccgccttggaagaaatgctttacatt
gccatggaagactatgagatagactgggtcatcggccaaggaccggcagcacgaaccatg
cggattccgctgccacgtttcaccttgattggagcgacgacaaaggcgggtcaagtcagt
tctcctctccatagccgtttcggcatcacctgtcatattgatttttataatgaaaacgaa
ctgtcgggaattattctccgttccagtggaatagtgggaacggagattacccctgacgcg
gtttctctgcttgcccgttgttccaggggaactccccgcattgccaaccgcttgctccgg
cgtctcagggattttgcggatgtcataggtacaggaatagttgatgtggacatcgtccat
gaaggaatgaaacgtttgggcattgatctcaacggattggacgaacaggacaggaacata
ctccgcactatcattgaattttatgatggaggacctgtcggtgccgataccctgtccatt
tccgtaggtgaggcgagtgaatcccttgaggatttctatgaaccttatcttattcagaaa
ggatatctgaaacggactccacgcgggagaatggtcacacggaaggcatacgagcttttg
ggcataccatgcgaaaggaaaatggatgaagaccaaggaattcttttttga
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