Parasphaerochaeta coccoides: Spico_0596
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Entry
Spico_0596 CDS
T01469
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scc
Parasphaerochaeta coccoides
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scc03016
]
Spico_0596
Enzymes [BR:
scc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Spico_0596
Transfer RNA biogenesis [BR:
scc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Spico_0596
Prokaryotic type
Spico_0596
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AEC01824
UniProt:
F4GK52
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All DBs
Position
689311..690186
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AA seq
291 aa
AA seq
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MENKSSILLLRKPPGVTSFASLFPIKHLVSPHVGHAGTLDKFADGLMIVLTGKLTRLNPV
FSGLDKKYRAVFHFGRETDTLDPEGDVVAEAPVPDEAIIREAINSGFLGTVMQRPPAFSA
IHVGGERAHRLVRSGRPVDIPERPVTIHSFNVVSWEPPFLTADIHVSKGTYIRSIARDLG
HACASHCFVQHLTRTAIGPYTLEEAVTADDYAGIWNLVGEADRLLLRLSSCGVLRLEDED
MWNLTAAGTMPLATLHGKNYAIAYDRKGIAQAVLAIDSQGRCTKALARFAG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggagaataagtcctccatactcctgttgcgcaaacccccaggggtgacgtcgtttgct
tctctttttcctataaaacatcttgtctccccgcatgttggtcatgcggggactcttgat
aagttcgctgacggtctgatgatagtcctgacaggcaaactgacgcggcttaatcccgtt
ttcagtggtcttgacaagaaatatcgtgctgttttccattttggcagggaaaccgatact
ctcgatccagaaggggatgttgtcgctgaagctcctgtaccggatgaagctatcatacgt
gaagcgatcaacagtggttttcttggtacggtcatgcaacgaccacctgccttttccgct
atacatgtcggaggagaaagggcgcacaggcttgtccgcagcggtcgtcctgttgatata
ccggaacgtcctgtcaccattcattccttcaatgtcgtctcttgggaaccgccatttctc
accgcagatatccacgtaagcaaaggaacatacatccgatccatcgcccgggatctgggt
catgcctgcgcaagccactgtttcgtccagcaccttaccagaacggcaatcggcccttat
actcttgaggaagctgtcacggcagatgattacgcaggcatctggaatcttgtcggggaa
gcggatagactgcttttacgcctgtcttcatgtggcgttctcagactggaagatgaagat
atgtggaatctgacggctgctggcacaatgccgctcgcaaccctacatggaaaaaattac
gccatagcctatgaccggaaaggcatcgcgcaagctgtccttgccattgattcacagggt
aggtgtacgaaagctttggccagattcgccggatga
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