Parasphaerochaeta coccoides: Spico_0738
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Entry
Spico_0738 CDS
T01469
Name
(GenBank) Integrase catalytic region
KO
K07482
transposase, IS30 family
Organism
scc
Parasphaerochaeta coccoides
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Spico_0738
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Gene cluster
GFIT
Motif
Pfam:
HTH_38
HTH_23
HTH_29
CENP-B_N
HTH_AsnC-type
HTH_24
HTH_IclR
HTH_36
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
AEC01964
UniProt:
F4GLJ4
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Position
865088..866389
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AA seq
433 aa
AA seq
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MAKNHLTLSERIRIEGMVSQGISFARIAKELGKDRSTVSREVRRHPKEKKSGGYSRRFND
CRKRTGCPASGNCDDPGCRRERCSGCAAGCSRKLCPTYEQEICGKLRVVPYVCNACVDRS
RCTLTKVFYEATHAQKEYLEDLSASRSGLAITEEEARAIQQIISPLLAQGQSLYSINQRH
GQLIMRSTKTLYTYVNAGVFPDIGNIDLPRKVTYRRRKRKDGHQYKGDRRYRVGRTKEDF
DAFMRERGNLSPVQMDTVEGPRSERRCLLTLQFTSCSVQLAFLREAHDAASVRAVFASLR
QRLGDGFPLLFPVILTDNGSEFSCPEALETDGQGELLTRVFYCHPMACWEKAACENNHAL
IRRILPKGRTFSDLTQQKVDMMMNHVNSYPRAQYGGKSAYEMFVFLYGQELAQRIGLENV
PTRNITLKPVLID
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaatcatctgacgttgagtgagagaatcagaatagaggggatggtgtcccaa
ggaatcagttttgcccggatagccaaggaactgggcaaggatcgctctacggtgtcgcgg
gaagtgcgccggcacccgaaggaaaagaaatcgggaggctacagccggcgtttcaacgac
tgtcgcaagaggacgggatgtccggccagtgggaactgtgacgatccggggtgccgcaga
gagaggtgcagcgggtgtgccgcgggctgttcgcggaagctgtgccccacctacgagcag
gaaatctgcgggaaactgcgggtcgtgccgtatgtgtgcaatgcgtgtgtggacaggagc
cgctgtacgctgacgaaggtcttctacgaggcgacgcacgcgcagaaggagtatctggag
gacctgtccgcgagcaggtcaggtcttgccattacggaagaggaggcccgggccatccag
cagatcatctcacctctgctcgcccagggccagagcctgtacagcatcaaccagaggcac
ggacagctcatcatgcgttcgaccaagacgctgtacacgtatgtgaatgcgggagtcttt
cccgacatagggaacatcgacctgccccgcaaggtcacctatcgcagacgcaagaggaag
gacgggcatcagtacaagggggacaggcgctatcgtgtcggaaggaccaaggaagacttc
gacgccttcatgcgggagaggggaaatctctctccggttcagatggacacggtggaagga
ccccgctcagaacgcaggtgcctgctgacgttgcagttcacctcctgttcggtgcagctg
gccttcctgagggaagcacatgacgcggcctcggtacgtgcggtgtttgcctccctccgc
cagcggctgggagacggcttccctctgctgtttcccgtcatcctgacggacaacggttcc
gagttctcctgcccggaggcactggagaccgatgggcagggagagcttctcacccgtgtg
ttctactgtcatccgatggcgtgctgggaaaaggccgcctgtgagaacaaccatgccctt
atcaggagaatactccccaaggggcgcacgttctcggatctgacgcagcagaaggtggac
atgatgatgaaccatgtcaattcctatccgcgggcccagtacggcggcaagtccgcctac
gagatgttcgtctttctctatgggcaagaactggcacaaagaatcgggcttgagaatgtt
cccactcggaatattaccctcaagcccgtcctgatcgactag
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