Parasphaerochaeta coccoides: Spico_0893
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Entry
Spico_0893 CDS
T01469
Name
(GenBank) extracellular solute-binding protein family 1
KO
K10117
raffinose/stachyose/melibiose transport system substrate-binding protein
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spico_0893
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scc02000
]
Spico_0893
Transporters [BR:
scc02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
Spico_0893
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
AEC02117
UniProt:
F4GI04
LinkDB
All DBs
Position
complement(1035129..1036478)
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AA seq
449 aa
AA seq
DB search
MTITKKMLSIALVLLMVASLGFARGAKEDASATGKTNLTVLNYIDMSEPNSAREVEMVWD
VFSKENPDINVIREDLFNEPFHQKTEAYAASGNLPDVVYMWPGGRSTSLHTQHLTKDLRP
FLEKDGLLDDYAPAAIADQTAGYLAELPNGITSSHMMFVNTKLLKDNGLSIPKTYEDLKH
IQSVLKPKGIEVIGMDNKDQWVMQSCLFSLIVGRYGGASWYDDLAAGKITFQDPWFVKSL
EIIDDLYKSGLLNRNTLDVGYGNGRGNFATGRAAFYIDGDWATASFMTDVSTGKALITPA
AQANDFDMIIFPALPGEVLSGTTSGVVGTGFGISANVPAGSAREDAAWRLVKFLQGEYVQ
TYRLSTGASFPSNLNVDVAKVIKDNNLEPFIEKRATFYQKYGTTPVVDAVLHSDVFNVIN
QGLQEIGLGSKTPAQVASDVQKAWVAFNK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgacaattacaaagaaaatgctgtccattgccttggtgcttctgatggttgcttccctg
ggctttgcccgcggagcaaaggaagatgcctctgcaaccggcaagacgaacctgaccgtc
ttgaattacatcgacatgtccgagcccaacagtgcccgtgaggtggagatggtctgggat
gtattctccaaggaaaatccagacatcaatgtcatcagggaagatttgttcaacgagcct
ttccatcagaagacggaagcgtatgcggcatcaggaaatctgcctgacgttgtttacatg
tggccgggtggacgttccacgtccctgcacacccagcatctgacgaaagacctgcgcccc
ttcttggaaaaggacggattgttggatgactatgctcctgccgctattgccgaccagact
gctggctatcttgccgagctgccgaacggcattacatcatcccacatgatgttcgtgaat
acgaagcttctaaaggacaacggactttccatccccaagacatatgaagacctcaagcac
atccagagcgtcctcaagcctaagggaattgaagtcattggaatggacaacaaagaccag
tgggtcatgcagagctgcttgttctccctgatcgttggtcgttacggtggggcatcctgg
tatgacgacttggccgctggaaagattaccttccaggatccttggttcgtgaaatctctg
gaaataatcgatgacctgtacaagagcggactgctcaaccgcaacactcttgatgtcggc
tatggcaacggtcgcggtaacttcgccactggccgcgcggcgttctatattgatggagat
tgggcaaccgcttccttcatgacagacgtttctacaggcaaggctttgattactcctgcg
gcacaggccaatgattttgacatgattatcttcccggctcttcccggcgaggtactctct
ggaacgaccagtggtgtcgtcggcacgggcttcggcatcagtgccaacgttccggcaggc
tccgcgagagaagacgctgcatggagattagtgaagttcttgcaaggtgaatatgtgcag
acataccgcctgtccacaggtgcgtccttcccgtccaacctgaacgttgatgtggcaaag
gtcatcaaggacaacaatctggaaccgttcatcgagaagagagctacgttctatcagaaa
tatggtacgactcctgttgtcgatgcagtcctccactctgatgtcttcaatgtaatcaac
caaggtcttcaggaaatcggtctcggttccaagactcctgctcaggtcgcttctgacgtg
cagaaggcatgggttgctttcaacaagtga
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