Parasphaerochaeta coccoides: Spico_0978
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Entry
Spico_0978 CDS
T01469
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc00061
Fatty acid biosynthesis
scc00071
Fatty acid degradation
scc01100
Metabolic pathways
scc01212
Fatty acid metabolism
scc02024
Quorum sensing
scc04146
Peroxisome
Module
scc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Spico_0978
00071 Fatty acid degradation
Spico_0978
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Spico_0978
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spico_0978
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scc01004
]
Spico_0978
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scc04147
]
Spico_0978
Enzymes [BR:
scc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Spico_0978
Lipid biosynthesis proteins [BR:
scc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Spico_0978
Exosome [BR:
scc04147
]
Exosomal proteins
Exosomal proteins of breast milk
Spico_0978
Exosomal proteins of breast cancer cells
Spico_0978
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AEC02202
UniProt:
F4GJD7
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All DBs
Position
1130357..1132105
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AA seq
582 aa
AA seq
DB search
MKHSWDILNAYRGKLVQGDWPTIPELFLISLERHPDRACFTVFDPGKNTLTYRDVHREIM
RIAGYLIEAGVKPGEKVVLTGANSPQWGLAYLAILFAGAVAVPLDTQMAEQRMLELGQFS
DSVFLFADYGHVEKFDKSHPWFRSLKGVVLLRSGKGKKQTTYSDIMNIKPQHAHERVLIS
SDSVAAILFTSGTTGNEKGAILTHTNLTSDAYQACDGIFLNISHEDVFYVFMPLHHSYCT
TAVFLESILHGSEAVFGSSMAVTKLLSDMKTGHVTIFLGIPLLYNKLLAGLMKKVREKGL
LAYGVIRLLMKINGILKRRFGINMGKKWFKTMLSGIGMLENSICICGAGPLAPQVFRQFQ
QLGLDFIQGYGLTEASPILTLNPVSKFKIDSIGMIFPLVEMKVDSPNASGVGELVVKGPN
ICQGYYKDPKQTAELFTKDGYMRTGDLGSIDEENYVYLKGRIKNMIVTDGGKNVYPEEIE
DGFQLYPQVEQVLVRGYIADKALKKEAIEVLIFPNSDYYKGKGITDKTVIRKDLEKVVAE
VNRTLVAYKKISRIIILDEAMDMTSTKKIKRTSVGHTEDVIA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaaacattcctgggatatcctgaacgcatatagaggaaagctggtacaaggcgactgg
ccgacaataccggaactattccttatctcactggaacgacatcctgacagggcatgtttt
actgtctttgatccaggcaagaacaccctgacataccgggatgtccacagagaaatcatg
cggatagctggatatctcattgaagcgggcgtgaaaccgggagaaaaggtagtcctgaca
ggagcaaattccccacagtggggactggcttatcttgcaatcctttttgctggcgccgtt
gccgttcctctggatacccagatggctgaacagcggatgttggagctgggacagttcagt
gattccgtattcctgtttgcggattatggacatgtggagaagtttgataaatcacatccg
tggtttcgcagcttgaagggagtcgtactgctacgttccggcaagggcaagaaacagacg
acatattccgacatcatgaacatcaaaccccaacacgcgcatgagagagtcctgatttcc
tctgacagcgtggcggcgatacttttcaccagcggaactaccggtaatgaaaaaggtgcc
atactgactcatacgaacctgaccagcgatgcttaccaagcatgtgatggcattttcctt
aacatctcccatgaagatgtcttctacgtcttcatgcctctgcatcatagctactgtact
actgctgtcttccttgagagcattctccatggcagcgaagccgtattcggttcctccatg
gcagtgacgaagctgctatctgacatgaagactgggcatgtcaccatatttctcggaatc
cctctgctttacaacaaactgcttgcaggcttgatgaaaaaggtacgggagaaggggctg
cttgcctatggagtcatcaggctgctgatgaagattaacggcatcctgaaacgtcgtttt
ggcatcaacatgggaaagaaatggttcaagactatgttaagcggaatcggcatgctggag
aacagtatttgcatctgtggagcaggaccgcttgctcctcaggtcttccgtcagttccag
cagcttggtctggattttatccaagggtatggtttgactgaagcttctcccatcctcact
ctcaaccctgtaagcaagttcaagattgattccatcgggatgatctttcctcttgttgaa
atgaaagtagattcaccgaatgcctcaggcgtcggagaactggtagtcaaagggccgaat
atctgccaaggatattacaaggatccgaaacagactgcggagcttttcaccaaggatgga
tacatgcgtaccggagaccttgggtcaatcgatgaagaaaactatgtgtatctcaaagga
cgcataaagaacatgattgtcaccgatggcggcaagaatgtctatcctgaggaaatcgaa
gatggattccagctgtatccccaggtagaacaggttttggtacgaggatatattgctgac
aaggcgctgaaaaaagaagcaattgaggttcttatatttccaaactcggactactacaag
ggaaaaggcatcacggacaagaccgtgattcgcaaggatctggagaaagtagtcgccgag
gtgaacagaacgctggtagcatacaagaaaatatccaggattatcattcttgatgaggca
atggacatgaccagtaccaagaagatcaagcgcacgtccgtcgggcatacggaggacgtc
atagcctga
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