Parasphaerochaeta coccoides: Spico_1088
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Entry
Spico_1088 CDS
T01469
Name
(GenBank) amino acid/amide ABC transporter ATP-binding protein 2, HAAT family
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc02010
ABC transporters
scc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spico_1088
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spico_1088
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scc02000
]
Spico_1088
Transporters [BR:
scc02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Spico_1088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
SMC_N
RsgA_GTPase
Dynamin_N
ABC_ATPase
BCA_ABC_TP_C
AAA_23
AAA_22
MMR_HSR1
AAA_15
NB-ARC
AAA_16
AAA_25
AAA_27
TsaE
AAA_14
nSTAND1
AAA_33
AAA_28
NACHT
nSTAND3
Fascin
Motif
Other DBs
NCBI-ProteinID:
AEC02309
UniProt:
F4GKB3
LinkDB
All DBs
Position
complement(1252838..1253581)
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AA seq
247 aa
AA seq
DB search
MSELLSIDGITVSYGSITALRDVSMHVNEGEIVSLIGANGAGKSTLLKAIVGQVPLSSGS
VKYKGDAICVSKGETHSHSLRTDQIARSGIALVPEGRRVFADLTVEENLDMGAFMVRDDA
LIARKKQEMYDFFPILGARRRQKTRSLSGGEQQMMAIARALMSSPHLLLLDEPGLGLAPL
IIQDIFHKIRLINREDKVTVFLVEQNARMALKASDNGYVMENGRIVLSDSGAALLTNPQV
RAAYLGE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactcctctccattgacggaatcaccgtatcatatggcagcataaccgccttg
cgtgatgtgagcatgcatgtcaacgaaggcgagattgtctctctgattggagcgaacgga
gctggaaaaagtacattgctcaaggccatcgtcgggcaggttcctctatcgtccggttcc
gtgaagtacaagggagatgcaatctgcgtgtccaaaggagagactcatagtcattcgctc
cggactgaccagattgcccgtagtggcatagccttggtgccggaaggacgacgggtcttt
gccgacctgacggtcgaggaaaaccttgacatgggagccttcatggtcagggatgatgcc
ctgatagcgcgaaagaagcaggaaatgtatgatttctttcccatcctgggcgcccggcgc
agacagaagacacgttccctgtcaggtggcgaacagcagatgatggccatagcccgtgcg
ctgatgagctccccccatcttcttttgctggacgaacccggtcttggccttgctcccctc
atcatccaggacatctttcataagattaggctgattaacagggaagataaggttacggtg
ttcctggtggagcagaacgcacgcatggctttgaaggcttcggacaacggatatgtgatg
gaaaacggcagaatcgtgttgtctgacagcggggctgcgctcctgaccaatcctcaggtt
cgcgcggcttatctgggggaatga
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integrated database retrieval system
