Parasphaerochaeta coccoides: Spico_1092
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Entry
Spico_1092 CDS
T01469
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
scc
Parasphaerochaeta coccoides
Pathway
scc02010
ABC transporters
scc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spico_1092
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spico_1092
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scc02000
]
Spico_1092
Transporters [BR:
scc02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Spico_1092
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AEC02313
UniProt:
F4GKB7
LinkDB
All DBs
Position
complement(1256560..1257738)
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AA seq
392 aa
AA seq
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MKKKILLMLVLALVGSLAVFAGGSKESAGSAAATIGFIGPLTGDNANYGILTSQAARLAV
EQFNAKGGIAGTPVTLRLEDSEGNAEKALAAIEKLSGTDKIVALAGPVFTGESFAVGERV
QNEGIAMISPSATHKDITAIGNYVFRTVVSDGLQGEVAGNYFYEVLGYRNIAVLYAKNDY
SQGLYEGMSASFVARGGKIVIAETLMVGDKDFKTQLTKIRAANPEAIYIPNYTAEMAQIL
EQANQLGITVPFLSCDGFSDPAIYDLAGNFTHGVIYLGPAKVAQNEVYDKFLADYQAKWG
VGPDSFATNMFDGTNIILNALKSVHAATGGFDRAKVRDAIAATKDYIGANGVINFAENGD
LVAYQGVYKVNGKTPEYLGTYTVENGKLIKLD
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaagatccttttgatgcttgtgcttgcattggttggttcgcttgcagtcttt
gccggaggttccaaggaaagtgccggtagtgccgctgctacgattggattcatcggacct
ctgaccggtgacaatgcaaactacggtatcctgacaagccaggccgcccgccttgccgtc
gaacagttcaatgccaaaggaggcattgcaggcactcccgtcaccttgcgccttgaagat
tccgaaggaaacgcggagaaagctcttgcggccatcgagaaactttccggcaccgacaag
attgtggcgcttgcgggtcctgtgttcactggcgagtccttcgccgtaggggaacgcgtg
cagaatgaaggtatcgcgatgatcagcccttccgccacacataaggacatcaccgctatt
ggtaattatgtcttccgtacagtagtctccgatggacttcagggtgaagtcgccggaaat
tatttctacgaagtactcggctaccgcaacatcgccgtcctctatgcaaagaacgactat
agccaagggctgtatgaaggcatgagcgccagctttgtagccagaggcgggaagattgtc
attgccgagaccctgatggtcggcgacaaggacttcaagacccagctgacaaagattcgc
gcggcgaacccggaagctatctacatccccaactataccgctgagatggctcaaatcctt
gagcaggcgaatcagcttggcattaccgtgccgttcctttcctgtgacggtttttcagat
cccgcaatctatgatttggccgggaactttacccacggcgttatctacttgggacctgcc
aaggttgcgcagaacgaagtgtatgataaattccttgctgattaccaggcaaaatgggga
gtcgggcctgattccttcgcaaccaacatgttcgatggaaccaacatcattttgaacgcc
ttgaagtccgtccatgcggctaccggaggtttcgacagggctaaagtccgtgatgctatc
gccgccaccaaggattatatcggagcaaacggcgtcatcaacttcgcggagaacggagac
ttggtcgcctaccagggagtctacaaggtcaatggcaagactcctgaatatcttggcacc
tacaccgttgagaacggaaagttgatcaagctcgactaa
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